KEGG   Taeniopygia guttata (zebra finch): 100222551
Entry
100222551         CDS       T01082                                 
Symbol
RAB40C
Name
(RefSeq) ras-related protein Rab-40C
  KO
K07928  Ras-related protein Rab-40
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tgu04121]
    100222551 (RAB40C)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:tgu04031]
    100222551 (RAB40C)
Ubiquitin system [BR:tgu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul5 complex
    Target recognizing subunit
     100222551 (RAB40C)
GTP-binding proteins [BR:tgu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab40
    100222551 (RAB40C)
SSDB
Motif
Pfam: Ras Roc SOCS_box Arf MMR_HSR1
Other DBs
NCBI-GeneID: 100222551
NCBI-ProteinID: XP_012431960
Position
14:15309078..15345839
AA seq 285 aa
MRGRMGTQGSPVKSYDYLLKFLLVGDSDVGKGEILESLQDGASESPYAYSNGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKIWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSMANGMNAVMM
HGRSYSLASSGGGSSSKGNSLKRSKSIRPPQSPPQNCSRNNCKIS
NT seq 858 nt   +upstreamnt  +downstreamnt
atgagaggcaggatgggcacccagggcagcccggtgaagagctacgattacctgctcaag
ttcctgctggtcggcgacagcgacgtggggaagggggagatcctggagagcctgcaggac
ggcgcctccgagtccccctacgcctacagcaacggaattgactacaagaccactactatc
ttgttggatggcagaagggttaagctggagctctgggacacctcagggcaaggaagattt
tgcactattttcagatcctactccaggggagcccagggaattctcttggtgtacgacatc
actaatcgctggtcctttgatgggatagaccgatggataaaggaaatagatgagcacgct
ccaggtgtccctcggatcctggtgggcaacaggctgcacctggccttcaagcggcaggtg
ccgacggagcaggcgcgcgcctacgccgagaagaactgcatgaccttctttgaagtgagc
cccctgtgcaacttcaatgtcatcgagtccttcacggagctgtcccgcatcgtcctcatg
cggcacggcatggagaagatctggagacccaaccgagtgttcagcttacaggacctgtgc
tgccgagccatcgtgtcctgcaccccggtgcacctcatcgacaagctccccttgcccgtc
accatcaagagccacctgaaatccttctccatggccaacgggatgaacgccgtgatgatg
cacggccgctcctattccctggccagcagcgggggcgggagcagcagcaaagggaacagc
ttgaagagatccaaatccatccggccgccccagagccccccacagaactgctcacgcaac
aactgcaagatctcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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