KEGG   Taeniopygia guttata (zebra finch): 100223523Help
Entry
100223523         CDS       T01082                                 

Gene name
THBS4
Definition
thrombospondin 4
Orthology
K04659  
thrombospondin 2/3/4/5
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
Phagosome
Focal adhesion
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:tgu00001]
 Environmental Information Processing
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100223523 (THBS4)
 Cellular Processes
  Transport and catabolism
   04145 Phagosome
    100223523 (THBS4)
  Cell communication
   04510 Focal adhesion
    100223523 (THBS4)
Exosome [BR:tgu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100223523 (THBS4)
  Exosomal proteins of colorectal cancer cells
   100223523 (THBS4)
  Exosomal proteins of bladder cancer cells
   100223523 (THBS4)
Heparan sulfate/heparin binding proteins [BR:tgu00536]
 Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
  100223523 (THBS4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
Position
Z
AA seq 1052 aa AA seqDB search
MGRGRNGQLTERVNTANKNKLRTLDRPPPRPPPASGGGAPANGPAPAAGRARPRGRPVKR
RGAVCRGGRASPPCPVRERHGGVQTSARRREPCLAAERSALQVLGEPPLPVGAQSAPAEP
PGLAERDGVFDLLPYSNKRVVLNFLQQAFGDPMLNEVYLLSTFKLQPKSTATVFGLYSSA
DNSKYFEFTVMGRMSKAVLRYLKSDGRLNSVIFSNIQLADGKPHAVILWLSGLQQGLSTV
ELYLDCLQVGAIEDLPKPFSALSQKVVSAELRTLQEKPQDTLDELKLVTGGTLAEVGNLQ
DCFLQQIEAVPQYTGDFNRQLMGQMMQMNQLLGDVKDLLRQQVKETTFLRNTIAECQACG
LGTVSFPTQLPRRTKPKCEVNSCFRGVRCMETAEGFQCGPCPEGLTGNGVTCSDIDECRY
NPCFPGVRCVNTAPGFRCETCPPGYTGQAVQGIGLSYAKNNKQVCLDIDECQNGGLGLCV
PNSHCINTLGSYQCGHCKPGYTGDQTRGCQAERSCRNQALNPCSIHARCIEEKRGEVTCT
CGIGWAGDGYICGKDVDIDGYPNEELSCSAENCRKDNCRFVPNSGQEDADGDGIGDACDD
DADGDGIPNEQDNCVLVPNVNQRNSDQDIFGDACDNCRNVLNNDQRDTDGDGKGDACDDD
MDGDGIKNLLDNCQRIPNEDQEDTDNDGVGDACDSCPTISNPNQSDVDNDLVGDSCDTNQ
DSDGDGHQDSTDNCPTVINSSQLDTDKDGLGDECDDDDDNDGIPDLLPPGPDNCRLVPNL
GQEDDNGDGVGDVCESDFDQDTVIDRIDVCPENAEITLTDFRAYQTVVLDPEGDAQIDPN
WVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFY
VVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHLRNSLWHTGDTNDQVRLLWKD
PRNVGWKDKVSYRWFLQHRPQIGYIRARFYEGSDLVADSGVTIDTTMRGGRLGVFCFSQE
NIIWSNLKYRCNDTIPEDFQEFQAQQFGVGDI
NT seq 3159 nt NT seq  +upstreamnt  +downstreamnt
atgggcagaggaagaaacgggcaacttacggagagggtcaacactgctaacaagaataag
ctaagaacgctcgaccgtccccctccgcggcccccgcccgcctccggagggggagccccg
gccaatggcccggcgcctgccgccggccgtgcccggccccggggccgccccgttaaacgg
cggggcgcggtgtgccgcggcggccgtgcctcgccgccttgcccggtccgcgaacgacat
gggggtgtccagacctccgcccgccgccgggagccctgcctggcagcggaacggagcgct
ctgcaggtgctgggggagccgccgctgcccgtcggggcgcagagcgcgcccgcggagccg
cccggactagcggagagagatggcgtttttgatcttcttccttattccaacaagcgagta
gtacttaacttcttgcaacaagcatttggggatcctatgctgaatgaagtgtacttgctc
tcaacattcaaattacagccaaagagcacggccactgtttttggcctatattcatcagct
gacaacagcaagtattttgaatttacggtaatgggacggatgagtaaagcggtgctgcgc
tatctgaagagtgatggaaggctgaattctgtgatctttagcaacatccagctggctgat
gggaaaccccatgctgtcatcttgtggctgagtggcctgcagcagggattgagcacagta
gagttgtatctggactgcctgcaagtaggtgccattgaggacttgccaaaaccattttca
gcactgtctcagaaggtggtgtcagctgagttgcgcactctccaggaaaagccacaggat
acactagatgagctaaagctggtaactggaggaacccttgctgaagtgggaaacctgcag
gattgttttcttcaacaaattgaggctgtacctcagtacactggtgattttaataggcag
ctgatgggtcaaatgatgcagatgaaccaactactgggagatgtgaaagaccttcttaga
caacaggtcaaagaaacaacttttctgagaaataccatagctgagtgccaagcatgtggt
ttaggcactgtgagttttccaactcagcttcctaggcgcactaaaccgaaatgtgaagtt
aattcctgcttcaggggagtgaggtgcatggagacagcagagggatttcagtgtgggccc
tgcccggaaggactcacgggaaatggagttacatgctcagatattgatgagtgtcgttac
aacccttgcttccctggtgtgcgatgtgtgaacactgctccaggtttccgatgtgagacc
tgtcctccaggatatacgggacaagctgtgcaagggataggactcagctatgccaagaac
aataagcaggtctgcttagatattgatgaatgtcagaatggaggacttggactctgtgtt
ccgaactcccattgcataaacactttggggtcttaccagtgtggccattgcaaaccagga
tatacaggagaccaaaccaggggatgccaggctgaacggagctgtaggaatcaagccctc
aatccatgcagcatccatgcccgatgtattgaggagaagagaggagaggtgacatgtact
tgtggcattggctgggctggtgatggttatatttgtggaaaagatgttgacattgatggc
taccctaatgaagaactgtcatgctctgctgaaaactgcagaaaggacaattgcagattt
gttccaaactctggacaagaagatgctgatggtgatgggatcggagatgcctgtgatgac
gatgcagatggagatggcattcccaatgagcaggataactgtgtcttggttcctaatgtt
aaccagagaaacagtgaccaagatatctttggagatgcttgtgacaactgccgtaatgtc
ctgaataatgaccagagggacacagatggtgatgggaaaggagatgcatgtgatgatgac
atggatggagatggtattaagaaccttttggataattgtcagaggatccccaatgaagac
caggaggacacagataatgacggtgttggtgatgcctgtgacagctgccctacaatcagc
aacccaaaccagtcagatgtcgacaatgacctggttggagattcctgtgataccaatcag
gacagcgatggtgatgggcaccaggacagcacagacaattgccctacagttattaacagc
tcccagctggacacagataaggatgggctgggtgatgagtgtgatgatgatgatgataat
gatggcattcctgacctcttgcctccgggccctgacaactgcaggctggtccccaacctg
gggcaggaagatgataatggtgatggagttggcgatgtctgtgagtctgattttgaccag
gacacagtgattgatcggattgatgtgtgccctgagaatgcagagatcaccttgacagac
ttcagggcctatcagacagtggtgttggacccagagggggatgcgcagattgatcccaac
tgggtggttctgaaccaggggatggaaattgtgcagactatgaacagtgatcctggcctt
gctgttggttacacggcttttaacggcgttgactttgagggcacttttcatgtgaacaca
gtgacagatgacgactatgctggctttatttttggttatcaagacagctctagcttttac
gtagtaatgtggaaacagacggaacagacatactggcaagcgactcccttccgagctgtt
gcagagcccggcattcagctaaaggctgtgaaatccaagacaggtcctggtgagcacctc
cgcaactccctctggcacacaggggacaccaatgatcaggtcaggctgctgtggaaggac
ccccgaaatgtagggtggaaagacaaagtctcctatcgctggttcttgcagcacagacct
cagattggttatatcagggcaagattttatgaaggctctgacctagtggcagattctggt
gtaaccatagacaccacgatgcgtggaggacggcttggagttttctgcttctctcaggaa
aacattatttggtccaacctgaaatatcgctgcaatgacaccatcccagaggactttcaa
gaatttcaagcgcagcaatttggtgttggggatatttaa

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