KEGG   Taeniopygia guttata (zebra finch): 100223803
Entry
100223803         CDS       T01082                                 
Symbol
TRIM8
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8
  KO
K12001  tripartite motif-containing protein 8 [EC:2.3.2.27]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tgu04121]
    100223803 (TRIM8)
Enzymes [BR:tgu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100223803 (TRIM8)
Ubiquitin system [BR:tgu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100223803 (TRIM8)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-B_box zf-RING_10 zf-RING_5 Amidoligase_2 U-box
Other DBs
NCBI-GeneID: 100223803
NCBI-ProteinID: XP_004174888
Ensembl: ENSTGUG00000010157
Position
6:22286648..22316825
AA seq 551 aa
MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKESGLVRCPECNQAYN
QKPNLEKNLKLTNIVEKFNSLNLEKPPSVLHCVFCRRGPPLPAQKICLRCEAPCCQSHVQ
THLQQPSTARGHLLVEAEDVRAWSCPQHNAYRLYHCEAEQVAVCQFCCYYSGAHQGHSVC
DVEIRRNEIRKMLMKQQDRLEEREQDIEEQLYKLESDKRLVEEKVSQLKDEVRLQYEKMH
QILDEDLRKTMEILDKAQAKFCNENAAQVLHLNERMQEAKKLLSSVQVMFDKTEDINFMK
NTKSVKILMDRTQNCTGGSLPPPKIGHLNSKLFLNEIAKKEKQLRKLLEGPLSTPVPFLQ
SIPMYPCTVSNSGAEKRKHSTAFPEGSFLEPSSGTVASQYMSQGASAGEGQSAQAMVPCS
STQHIVGLPSGPQPVHSGSVFNPSHYPNTTSSQQSVLSQYGGRKILVCSVDNCYCSSVSN
HSGHQPYPRSGHFPWTVSSQEYSHPLPPAPAVPQSLPGLAVREWIDASQQHGRQDFYRVY
GQPSAKHYVTS
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggccgagaattggaagaactgcttcgaagaggagctcatctgccccatttgcctgcat
gtctttgtggagccggtccagctgccctgcaagcacaacttctgccggggctgcatcggg
gaggcgtgggccaaggagtcgggcttggtgcggtgcccggagtgcaaccaggcctacaac
cagaagcccaacctggagaagaacctgaagctcaccaacatcgtggagaagttcaactcc
ctcaacctggagaagcccccctcagtcctgcactgcgtcttctgccgccggggcccgcca
ctgccggcccagaagatctgtttgaggtgcgaggctccgtgctgccagtcccacgtccag
acccacctgcagcagccctccacagcccgggggcatctcctggtggaggcggaggacgtg
cgggcctggagctgcccccagcacaacgcctaccgcctgtaccactgcgaggccgagcag
gtggccgtctgccagttctgctgctactacagcggggcccaccagggacactcggtctgc
gacgtggagatccgccgcaatgagatccggaagatgctgatgaagcagcaggaccgcctg
gaggagcgggagcaggacatcgaggagcagctctacaagctggaatcagacaagcggctg
gtcgaggagaaggtgagccagctgaaggatgaggtgcgcctgcagtacgagaagatgcac
cagatcttggatgaggacttgcggaagaccatggagatcctggacaaggcccaggccaag
ttctgcaacgagaacgcggcccaggttctgcacctcaatgaacgcatgcaggaggccaag
aagctcctcagctctgtccaggtcatgtttgacaaaactgaggacatcaacttcatgaag
aacaccaagtctgtgaaaatcttaatggacaggactcagaactgtacaggtggcagccta
cccccacccaaaattggccacctcaactccaagctcttcctgaacgagatcgccaagaag
gagaagcagctgaggaagttgctggaaggtcctctgagcacccccgtccccttcctgcag
agtatccccatgtacccctgcaccgtcagcaactccggcgcggagaagcgcaagcactcc
accgcctttcccgagggcagcttcctcgagccatcgtcagggactgtggcgagccagtac
atgagccagggcgcttcggctggcgaggggcagtccgcacaagccatggtgccttgtagc
tccacgcagcacatagttggacttcctagcggcccgcagccggtgcactcgggctccgtc
ttcaacccatctcactaccccaacaccacgtcatctcagcagtccgtgctctcccagtac
ggcgggcgtaaaatcctcgtctgttccgtggataactgttactgttcctcggtgtccaac
cacagcgggcaccagccctacccgcggtcggggcacttcccctggacagtgtcgtcgcag
gagtactcccacccgctgccgcccgcccccgccgtgccccagtcgctcccgggacttgcc
gtgagggaatggattgacgcatcccagcagcacgggcggcaggatttctatagggtctat
ggccagccgtcggccaaacactacgtcaccagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (36)   

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