KEGG   Taeniopygia guttata (zebra finch): 100224644
Entry
100224644         CDS       T01082                                 
Name
(RefSeq) keratin, type II cytoskeletal cochleal
  KO
K07605  type II keratin, basic
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tgu04812]
    100224644
   04147 Exosome [BR:tgu04147]
    100224644
Cytoskeleton proteins [BR:tgu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     100224644
Exosome [BR:tgu04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   100224644
  Exosomal proteins of other body fluids (saliva and urine)
   100224644
  Exosomal proteins of colorectal cancer cells
   100224644
  Exosomal proteins of bladder cancer cells
   100224644
SSDB
Motif
Pfam: Filament Keratin_2_head TPR_MLP1_2 CENP-F_leu_zip Vps53_N ATG16 CALCOCO1 Jnk-SapK_ap_N Crescentin ApoLp-III Metal_resist FPP COG6_N DUF4407 DASH_Duo1
Other DBs
NCBI-GeneID: 100224644
NCBI-ProteinID: XP_030115482
Ensembl: ENSTGUG00000004035
Position
Unknown
AA seq 488 aa
MSRSVTFSSRSAAGPALSQLRVSSVSSGRSSALGRGFGSASLYSLGSAGRRASPATGSSF
GARSGYGFGGSLSPGGIQEVTVNQSLLTPLNLEIDPSIQRVRKEEKEQIKTLNNKFASFI
DKVRFLEQQNKMLETKWSLLQEQKTTRSNIAPMFETYISNLRRQLDGLLADKGRLEGELK
NMQDLVEDFKTKYEDEINKRTAAENEFVVLKKDVDAAYMNKVELEAKVDALTDEINFLRA
FHEAELNELQAQISDTSVVLSMDNSRNLDLDSIIAEVKAQYEEIANRSRAEAESWYQSKY
EALQVTAGKHGDDLRNTKNEITEINRVIQRIQGEIENAKAQRAKLEAAVAEAEERGEMAL
KDARAKLEELEAALQKAKADMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLAGDG
VGNVNISVVSSSGGGGYSSSSGFLGAGIGGGLSLGSGMGSGALGFSSGGSTKSYTITTTS
SSRRSVRK
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgtcccgctccgtcaccttcagctcccgctcggccgccgggccggcgctcagccagctg
cgggtcagctccgtctcctccggccgcagctccgcgctcggccgcggcttcggcagcgcc
agcctctacagcctgggctcggccggcaggagagccagcccggccacgggcagctccttc
ggagcccgctcgggctacggcttcggcggcagcctcagccccggaggcatccaggaggtc
accgtcaaccagagcctcctgacgcccctcaacctggagatcgaccccagcatccagagg
gtccgcaaggaggagaaggagcagatcaagaccctgaacaacaaatttgcctccttcatt
gacaaggtgcggttcctggagcagcagaacaagatgctggagaccaagtggagcctcctc
caggagcagaagacgacacgaagcaatatcgctcccatgttcgagacctacatcagcaac
ctgcggcggcagctggacgggctcctggcggacaaggggcgcctggagggagagctcaag
aacatgcaggacctggtggaggacttcaagaccaaatacgaagatgagatcaacaagcgc
acggcagccgagaatgagtttgtggtgctcaagaaggatgtggatgctgcctacatgaac
aaagtggagctggaggccaaggtggatgctctgacggatgagatcaactttctgagggct
ttccatgaggcggagctgaacgagctgcaggcccagatctctgacacctcggtggtgctg
tccatggacaacagccggaacctggacctggacagcatcatcgccgaggtgaaggcgcag
tacgaggagatcgccaaccggagccgcgccgaggccgagtcctggtaccagagcaagtac
gaggcgctgcaggtgacagccgggaagcacggggatgacctgaggaacaccaagaacgag
atcacggagatcaacagggtcatccagaggatccagggggagatcgagaatgccaaggcc
cagcgagcaaagctggaggcggccgtggccgaggccgaggagcgcggggagatggccctc
aaggatgccagggccaagctggaggagctggaggctgctctgcagaaagccaaggctgac
atggcccggcagctccgggagtaccaggagctcatgaacgtcaagctggccctggacatc
gagatcgcgacctacaggaagctgctggagggcgaggagagcaggttggctggggatgga
gttggcaacgtcaacatctccgtggtcagctccagtggtgggggcggatattccagctcc
agcggattcctgggagcagggatcggaggaggcctcagcctgggatcaggaatgggcagc
ggagcactcggcttctcctctggaggctccaccaagtcctacaccatcaccaccacctcc
tccagccggagaagtgtcaggaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (29)   

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