KEGG T01082: 100228172

Taeniopygia guttata (zebra finch): 100228172

Entry

100228172 CDS T01082

Gene name

CLTC

Definition

clathrin, heavy chain (Hc)

Orthology

K04646

clathrin heavy chain

Organism

tgu Taeniopygia guttata (zebra finch)

Pathway

tgu04142	Lysosome
tgu04144	Endocytosis

Class

Cellular Processes; Transport and catabolism; Endocytosis [PATH:tgu04144]
Cellular Processes; Transport and catabolism; Lysosome [PATH:tgu04142]

SSDB

Motif

Pfam:

Clathrin Clathrin_propel Clathrin_H_link Clathrin-link Coatomer_WDAD TPR_7 TPR_1

Other DBs

NCBI-GI:

224076607

NCBI-GeneID:

100228172

Ensembl:

ENSTGUG00000007540

Position

AA seq 1670 aa
MLNLFLLFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRP
ISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDN
AVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS
VDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK
KAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV
TAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFA
RKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQG
QLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYLRANVP
NKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLAD
ITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMF
THYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLE
CLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDP
DVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVH
DLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDEL
VAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVV
GKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVLLESNP
YRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQ
NLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTSAVQVL
IEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAAN
ASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRC
YDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKE
FRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYS
KFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDA
WKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFTKVKQL
PLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLEKHELI
EFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQENKREC
FGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQ
ATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM

NT seq 5013 nt +upstreamnt +downstreamnt
atgttaaacctttttcttctcttccagctccaaaatctgggcatcaacccagcaaacatt
gggttcagcactctgacaatggagtctgacaaatttatctgcatcagagagaaagtagga
gaacaggctcaagtggtgatcatcgacatgaatgaccccagcaacccaatccggagacca
atttcagctgacagtgctatcatgaaccctgccagtaaagtcattgcattgaaagctggg
aaaacgctgcaaatctttaacatcgagatgaagagcaagatgaaggctcacaccatgaca
gatgatgtcaccttctggaagtggatctctctgaacactgttgccctcgtgacggataat
gcagtttaccactggagcatggagggggagtcccagcccgtgaagatgtttgatcgccac
tccagccttgccggctgccagatcatcaactacagaactgatgccaagcagaaatggctc
ttgctgactggaatatctgcacagcaaaatcgtgtagtgggagcaatgcagctgtactct
gtggacagaaaagtgtcccagcccatcgagggacatgcagccagctttgcacagttcaag
atggaagggaatgctgaagaatccactcttttctgttttgcagtaagagggcaagctggg
ggtaagctgcatatcattgaggttggcacaccacccactgggaatcagccctttccaaag
aaagctgtggatgtcttctttcctcctgaagcacaaagtgactttcctgttgctatgcag
atcagtgacaagcacgatgtggtgttcctcataacaaagtatggctacatccacttgtat
gatctggaaactggcacctgtatctacatgaacaggatcagtggagagaccatttttgtt
actgcacagcacgaagcaacagctggaattattggagtcaacagaaagggacaagtgctc
tcagtgtgtgtggaagaggagaacatcattccctacatcacgaacgtgctgcagaatcct
gacctggctttacggatggctgtccgcaacaacctggcaggggccgaggagctctttgcc
aggaaattcaatgcactctttgcacaggggaactattcagaggcagcgaaagtggcagct
aatgccccaaagggaatcctgcgtactccagacaccatacgccggttccagagcgttcca
gctcagccagggcagacttcccctctcctgcagtattttggcattctgctggaccaaggg
cagctgaacaagtatgagtcactggagctctgcagaccagtgctccagcagggccgcaag
cagctcttggaaaaatggttaaaagaagataaactggagtgctcagaggagctgggagac
cttgtgaaatctgtggatcctacactagcacttagtgtctatctgagagccaacgttcca
aataaggtcatccagtgttttgctgaaacaggacaagtccagaagattgttttgtacgct
aagaaggttggatatactccagactggatttttttgctgaggaatgtaatgagaatcagc
cccgatcaaggacagcagtttgcacaaatgcttgttcaagatgaagagcctcttgcagat
ataacacagattgtggatgtctttatggaatataatttaatccagcaatgtacagccttc
ctgctggatgcactgaagaataatcgtccctcagaaggtcccctgcaaacacgtttactt
gagatgaacctcatgcacgcgccccaggttgcagatgccatcctgggaaaccaaatgttt
actcactatgacagggctcacatagctcagctgtgtgagaaggctggtttgctgcagaga
gcactggagcacttcacagacctgtacgacatcaagcgtgcggtagttcacactcacctc
ctcaaccctgagtggttagtgaattattttgggtccttatcagtagaagactctctggag
tgtctgcgtgcgatgctgtccgctaacatccgtcagaacctgcagatctgtgtccaggta
gcttccaaataccacgaacagctgtcaacacagtcactcattgagctcttcgagtccttc
aagagctttgaaggtttgttttatttcctgggttccattgtaaacttcagccaggatcca
gatgtgcacttcaagtacattcaagctgcatgcaagacaggacaaattaaagaagtggaa
agaatctgcagggaaagtaactgctatgatccagaacgtgttaaaaacttcctcaaggaa
gctaaacttactgaccagctgcctctcatcattgtgtgcgaccgctttgactttgtccac
gacttggtgctgtatttgtatagaaataatctccaaaaatatattgagatttatgtacag
aaggtgaatccaagccgtctgccagttgttattgggggactgcttgatgtggattgctct
gaagatgtgatcaagaacctcatccttgtagtgagaggtcaattttcaactgatgaactc
gttgcagaggttgagaaaagaaacaggctgaagctgcttctgccctggctggaagcaaga
attcacgagggctgtgaggagcctgctactcacaatgcactggccaagatatacattgac
agcaacaacaacccagagagattcctgcgtgagaatccctactatgacagtcgtgttgtt
ggcaagtactgtgagaagagggaccctcacctggcctgcgtggcttacgagcgtggacag
tgcgatctggagctgattaatgtgtgcaatgagaactccctcttcaagagtctctcccgc
tacttagttcgtcgtaaggaccccgagctctgggccagtgtgctgctggaaagcaacccc
tacagaagacccctgattgaccaggttgtccagactgcgctgtcagagacccaggacccc
gaggaagtctctgtcactgtgaaggccttcatgactgcagatcttcccaatgagctcatt
gaactgctggagaaaatcgtgctggataattcagtgttcagtgagcacaggaatctgcag
aaccttctcatccttacagctatcaaggctgaccgcacccgtgtcatggagtacatcaat
cgcctggataactatgatgcccctgacatagccaatattgctatcagcaatgagcttttt
gaggaggcatttgctatcttcaggaagtttgatgtcaatacatcagctgtacaggtgttg
atagagcacattgggaacctggaccgtgcgtacgagttcgccgagcgctgcaatgaacct
gcagtgtggagccagctggccaaagcacagctccagaaggggatggtaaaggaggcaatt
gactcctacattaaggcagatgatccttcctcatacatggaagttgttcaagctgctaat
gccagtggaaactgggaagagctggtgaagtatctgcagatggcacgcaagaaggcccgg
gagtcgtatgtggaaacagaattaatctttgctcttgctaaaacaaaccgcctggcagag
ctagaggagttcatcaatggccccaacaatgcacatatccagcaggttggtgatcgctgc
tatgatgagaagatgtatgaagcagccaagctcttgtacaacaacgtgtccaacttcggc
cgtttggcctcaaccttggtgcacctcggcgagtaccaggcagccgtggatggtgctcgg
aaagccaacagcactcgcacgtggaaagaggtctgctttgcttgcgtggatggaaaagaa
ttccgcctggctcagatgtgtgggctccatattgtagtgcatgcagatgagctggaagag
ctaatcaactattaccaggatcgtgggtactttgaagagctgatcactatgttggaagca
gcgcttgggctggagcgagcacacatggggatgttcacagagctggcaattctctactcc
aagttcaagccacagaagatgagggagcacttggagctgttctggtccagagtcaacatt
cccaaggttttgagagctgcagaacaagcccatctctgggctgaactggtgttcctgtat
gataagtatgaagaatatgataatgccataatcacaatgatgaatcacccaacagatgct
tggaaagaaggccagttcaaagatatcatcactaaggtggccaatgtggagctgtactac
aaggcagttcaattctatttggaatttaagcctctgctgctcaatgatctgctgatggtg
ttgtcccctcggcttgaccacactcgtgctgtcaccttcttcacaaaggttaaacagctg
cccctggttaagccttacctgcgctctgttcaaaatcacaacaacaaatcagtcaatgag
tccctcaacaacctcttcattattgaagaagattaccaggctcttaggacttctatagat
gcttatgacaactttgacaacatttctcttgcccaacgtttggagaaacacgagctaata
gagttccgaaggatcgctgcctatctcttcaaaggcaacaaccgctggaaacagagcgtg
gagctctgtaagaaggacaggctctacaaggatgccatgcagtacgcttccgaatccaaa
gatactgagctggcagaagagctgctgcagtggttcttgcaggagaacaagagggaatgc
tttggtgcttgtctcttcacctgctacgatctcctaaggccggatgttgtcttggaaaca
gcgtggaggcacaacattatggactttgccatgccatactttattcaggtcatgaaggaa
tacttgaccaaggtggataaactggatgcatcagagtctttgagaaaggaagaggagcaa
gctacagaaacacaacctattgtttatggccagccccagctgatgctgacagcgggaccc
agcgtggcagttcctccgcaggcacctttcggctacggctacacggcccctccatacggg
cagccgcagcccggcttcggctacagcatgtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   ENSEMBL-TGU (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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