KEGG   Taeniopygia guttata (zebra finch): 100228268
Entry
100228268         CDS       T01082                                 
Symbol
TSC1
Name
(RefSeq) hamartin isoform X1
  KO
K07206  tuberous sclerosis 1
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04140  Autophagy - animal
tgu04150  mTOR signaling pathway
tgu04218  Cellular senescence
tgu04910  Insulin signaling pathway
tgu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    100228268 (TSC1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100228268 (TSC1)
  09143 Cell growth and death
   04218 Cellular senescence
    100228268 (TSC1)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    100228268 (TSC1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100228268 (TSC1)
SSDB
Motif
Pfam: Hamartin
Other DBs
NCBI-GeneID: 100228268
NCBI-ProteinID: XP_030142609
Ensembl: ENSTGUG00000005221
Position
17:complement(7348643..7375487)
AA seq 1154 aa
MAQQGNVGELLSMLDSPVLGVLEDITTVFKDNLICDRGPMLVNNLVDYYLETNSQQALHI
LSTLQEPHDKHLLDKINDYMGKAATRLPTLSLLGHVIRRQPSWKHKLSQAPLLLSLLKCL
KTDTDVVVLTTGVLVLITMLPMIPQSGKQYLHDFFGIFGRLSAWCLQNPGHVAEIYLVHL
HASVYSLFHRLYGMYPCNFVSFLRSHYSMKENLETFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKRLETHDVVIECAKISLDPAEASYEDGYYSVSRKLCTSIKHHQTDPSASSYID
TQSSYGTSTPYSTPRLTLSQMPGQLPQILSPQSMRLSTEPQQVTIWSPSAVCGMTTPPTS
PGVVPSESSQSAPQPYSKAFGTSAGGKGTPLGTPATSPPPPCTSDDFVHVSLPSAAATPP
KKEDKPDSVRPLLYRQQNVTNSDKSLDIPSSKSSVTLSDLPEFLGGLSFEDSAEKDREED
AISKEISEITTDAEHMVPRGGFDSPFYRTNESLSASQKKTHSAASSVQGHSQTSEPLTSL
DKSGPEGARETPKQTFTPIDKPCGGPGESPAGNREGTSGEPSILTPSPCKVPAQRRVVFG
SGQPPLYEHLFEVALPKTAYLFVGKKTEELLKKAKGTQDEDCMSSTSPVEVLDRLIQQGA
DAHTKELNKLSLPSKSADWTHFGGSPPSDEIHTLRNQLLLLHNQLLYERFKRQQHALRNR
RLLRKVIKATALEEHNAAMKDQLKLQEKEIQALKLSLQKEQARYHQFQEEHDNIVAQLHS
QIRQLQHDREEFYNQSQELQTKLEDCRNMITDLRLELKKANNKVCHTELLLSQVSQKLSN
SESVQQQMEFLNRQLLVLGEVNELYLEQLQHKHTDTKKEVEMLHAAYRKELEKAKLCVQQ
QSQRLDASQKRIAELESQLAKKDHLFLEQKKYLEDVKIQARGQLQAVESRYKAQKKITQA
FELEILDLFGRLEKSNLLKKLEDDKTEAAEAAEESRLDCGNEDTAGHSEETMGRNGETKP
PSARGSSSSKGGSSSELSTPEKPQNQRLSSRWETSVLLEPSTTVPLTVGSLPSSKSFLGM
KARELFRNKSESQCDEEGVTINRLSDALKTELCKDPSMESKVPPSPENLSPKLQESSVGQ
LHIMDYNETHHDHS
NT seq 3465 nt   +upstreamnt  +downstreamnt
atggcacagcaaggaaatgttggtgagctcctctcaatgctggattctccagttctgggt
gtcctggaagatataacaactgtattcaaagataatctcatctgtgaccgtgggcctatg
cttgtcaacaacctggtggactattacttggaaaccaattctcagcaggcactgcatatt
ctgtccactctgcaagagcctcatgacaagcatctactggacaaaattaatgattatatg
ggcaaagctgctactcgtttacccaccctctctctgctgggacatgtgataagacgacaa
ccatcttggaaacacaaactttctcaagcacctctcctgctttcattacttaaatgtctc
aagactgacacagatgtagtagtactcaccacaggtgtcctagtgctaataaccatgttg
ccaatgattcctcagtctggcaaacagtaccttcatgatttctttggtatctttgggcgt
ctctcagcctggtgcttgcagaatccaggtcatgtggcagagatttatcttgtccatctt
catgccagcgtttattctctctttcatcgtctttatggaatgtatccttgcaattttgtc
tcctttctgcgctctcactacagtatgaaggaaaacctggagacctttgaagaagtagtc
aagccaatgatggaacatgtgcgtattcatccagagttagtgactggatccaaggaccat
gaactggacccacgaaggtggaaaaggctagaaactcatgatgttgtgatagaatgtgcc
aaaatctccctggaccctgcagaagcctcctatgaagatggttattactctgtgtctcgg
aaactctgcacaagcataaaacatcatcaaactgaccccagtgccagctcttacattgat
acacagagcagctatgggacttctaccccatattccactcctcggctaacactatcacaa
atgccagggcagctacctcagattctgagcccacagtccatgaggctgtcaactgagcca
cagcaggtcaccatctggagcccttctgcagtgtgtggtatgaccacgccaccgacgtcc
cctggcgttgtcccatcagagtcatcccagtctgcaccacaaccctacagcaaagctttt
ggcacatctgcaggggggaaaggaacacctttgggaacaccagccacatctcctcctcca
ccctgcacttcagatgactttgtgcatgtttcactcccttcagctgctgccacacctcct
aaaaaggaggacaaaccagattctgtgaggcctttactgtaccgacagcaaaatgtcaca
aacagcgataaatcattggacatacccagtagtaaaagttcagtaaccttaagtgatctt
ccagagtttttaggtgggttgtcgttcgaagatagcgctgagaaggacagagaggaagat
gcaatatctaaagagatctccgagatcacgaccgatgctgaacacatggtgcctagagga
ggatttgactccccgttttaccgcacaaacgaaagtctgtcagcctctcagaagaagacc
cactcagcagcctccagtgttcagggacacagtcagacctctgagcctttaacatctctg
gacaagtctgggcctgagggtgcacgggaaacacccaaacaaacgtttactcccatagac
aagccctgtggaggccctggggaaagccctgctgggaacagggaaggaacctctggggag
ccaagtattctcactcccagcccttgtaaagtaccagcacaaaggagagtggtgtttggg
agtgggcagcctcccctctatgagcacctctttgaggttgcattaccaaagactgcctac
ctctttgttggcaagaagactgaggagctgctaaagaaagccaagggaacccaggatgaa
gactgtatgtcctcgacttctcccgtggaagtgctggacaggctgattcagcaaggagca
gatgcacacactaaggagctgaacaaattgtctctgccaagcaaatctgctgactggact
cactttggaggttctcccccttcagatgagattcacaccctgaggaaccagctgcttctg
ctgcacaaccagctgctgtacgagcgcttcaagaggcagcagcacgcgctgcgcaaccgc
cggctcctgcgcaaagtcatcaaagccacggctctggaggagcacaacgctgccatgaaa
gatcagctgaaactgcaggaaaaggagatccaggccttgaaactgagtctgcagaaagaa
caggcaaggtaccaccagtttcaggaggaacatgataatattgtggctcagcttcacagc
cagatccgacagctgcagcacgaccgggaggaattctacaaccagagccaggaattgcag
accaagctggaagactgcaggaacatgataacagatctgaggttagagttgaagaaggca
aacaacaaggtgtgtcacactgaattgctgcttagccaagtttctcaaaagctttccaac
agtgaatcggtgcaacagcagatggagttcttgaacaggcagctgctggttcttggggag
gtcaatgagctgtacctggagcagctgcagcacaagcacacagacactaaaaaggaggtt
gaaatgttgcacgctgcttatcggaaagaactggagaaagcaaagttgtgtgttcagcag
caaagccaaaggctggatgcttcccagaaaaggatagctgaactggaatctcagcttgca
aaaaaggaccacctcttcctggagcaaaagaaatacctggaagatgttaaaatccaagca
aggggtcagctgcaggcagtagaaagcaggtacaaggcccagaagaaaatcacccaggca
tttgagctggagatcttggatctgtttgggcgtctggagaagagcaacctactgaaaaaa
cttgaagatgataaaacagaagcagctgaagcagcagaagaaagcaggctggattgtggc
aatgaagatacagcaggacacagtgaagaaacaatgggtagaaatggagagaccaaacct
cccagcgcccgaggcagcagtagcagtaaggggggcagcagcagcgagctctccacccca
gaaaaaccccaaaaccagaggctgagcagtcgttgggagacatccgtgttgctggagccc
tcaactactgtcccactgactgtagggtcactccccagctccaagagcttccttggaatg
aaggcacgagaattatttcgcaacaagagtgagagccagtgtgatgaggagggggtcacc
atcaacaggctgtctgatgccctaaagactgaactatgtaaagatccaagcatggagtca
aaggtccctccaagccccgaaaacctctcacctaagctccaggaaagcagtgttggacag
ctgcatatcatggactacaatgaaactcatcatgaccacagttaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (1)   
   Pfam (1)   
All databases (51)   

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