KEGG T01082: 100228504

Taeniopygia guttata (zebra finch): 100228504

Entry

100228504 CDS T01082

Definition

clathrin heavy chain 1-like

Orthology

K04646

clathrin heavy chain

Organism

tgu Taeniopygia guttata (zebra finch)

Pathway

tgu04142	Lysosome
tgu04144	Endocytosis

Class

Cellular Processes; Transport and catabolism; Endocytosis [PATH:tgu04144]
Cellular Processes; Transport and catabolism; Lysosome [PATH:tgu04142]

SSDB

Motif

Pfam:

Clathrin Clathrin_propel Clathrin_H_link Clathrin-link Coatomer_WDAD TPR_7

Other DBs

NCBI-GI:

224071898

NCBI-GeneID:

100228504

Ensembl:

ENSTGUG00000008809

Position

AA seq 1672 aa
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGNYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMEHSLLQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLFLVKPYLRSVQNHNNKGVNEALNNLLTEEEDFQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLDASESLR
KEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM

NT seq 5019 nt +upstreamnt +downstreamnt
atggcccagatactgcccattcgcttccaggagcacttccagctccaaaatttgggcatt
aatccagcaaacattggattcagcaccctgacaatggaatctgacaagttcatctgcata
agggagaaagtaggggagcaggcacaagtagtgataattgacatgagtgatccaacaaca
cccatcagacgtccaatttctgcagaaagtgccatcatgaatccagcctctaaagtaata
gcactaaaagctgggaaaacacttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccatacaatggcagaggaagtgatcttctggaaatggatatctgtgaatacagttgcc
ttggtgacagagacagcagtgtaccactggagcatggagggagaatcacaaccccaaaag
atgtttgatagacatgctagtcttgcaggctgccaaatcatcaattacagaacagatgaa
caccaaaaatggctgctgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtattcggttgatagaaaagtctcccagcctatagaaggccatgcagcagct
tttgcagaattcaaaatagagggaaatgccaaaccttctaccctcttttgttttgctgtg
aggagtcctgcaggaggcaagctgcacataattgaagtaggtcagccagctactggaaat
cagccatttgtaaagaaagctgttgatgtgtttttcccacctgaggcacagacagacttt
cctgtggcaatgcagattggaattaagcatggtgtaatttatctgatcaccaagtatgga
tatatccacatgtatgatttggagtctggagtgtgcatctacatgaaccgtattagtgct
gatactatctttgtcacagctcctcatgaacctacctcaggcattattggtgtgaacaaa
aaaggacaggtgctttctgtatgtgttgaggaagacaacattgtgaactatgctacgaat
gttctccagaatcctgacttgggactgcgaatggctatacgtagtaacctagctggggca
gaggagttatttgccagaaagttcaacacactctttgctcaaggaaactatgcagatgcc
gctaaagtagcagcatctgcaccaaagggaattttacgtaccagtgatacaattaggaag
ttccagagtgtaccagctcagcctgggcaggcctctcccttgctccagtatttcggaata
ttgctcgaccagggacagctgaacaagtttgaatctctggagctctgtcgccctgtcctg
cagcagggccgcaagcagcttctggagaagtggctgaaggaagacaagctggagtgctcg
gaggagctgggagacttggtgaagacagccgacccaacccttgcactcagtgtctatctt
cgagctaatgtgccaaacaaagtgattcagtgctttgctgaaactggccaattccagaag
atagtgctgtatgctaagaaggttggctataccccagactggatcttcctactgagaagt
gtgatgagagtcagtccagaacaaggcctgcagttctctcagatgctggtacaggatgag
gagccgctggctaacattaaccagattgtggatgtgttcatggagcacagtcttctgcag
cagtgcacatcctttttgttggatgccctgaaaaataaccgccctgcagaaggccacctt
cagacccgtctcctggaaatgaatttgattcatgccccacaggttgcagatgccattctt
ggaaaccaaatgtttacacactatgatcgtgctcatgttgcccagctgtgtgaaaaggca
ggcttactccagcgagctttggagcactacacggatctctatgatattaaacgtgcagtt
gttcatactcacctcttgaatcctgagtggcttgtgaacttctttggctctctctcagtt
gaagactctgtggagtgtttgcgcgccatgctgtcagccaacattaggcaaaacctacag
ctgtgtgtgcaagttgcttctaagtaccatgaacagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggctccattgtaaac
tttagccaggatccagacgttcacttcaagtacatccaggcagcttgcaagaccggtcag
ataaaggaagtggaaagaatctgccgtgaaagtaactgttataacccagaacgagtgaag
aacttcctgaaggaggcaaagctcacagatcagcttccgctgatcattgtctgcgatcga
tttgactttgttcatgacctggtgctctatttataccgtaataatctgcagaagtatatt
gagatctacgtacagaaggtgaatcctagccgtataccagcagtggttggagggcttctt
gatgtagattgttctgaggatgtcatcaagaacttgatcatggtggtgagagggcagttc
tccacagatgaactggtggctgaagtggaaaaaagaaatcggcttaagttgctgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcgactcataatgctttggcc
aaaatctacattgacagtaataataatccagagcgcttccttcgtgagaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgttgct
tatgagagggggcagtgtgatctggaactcataaaggtgtgcaatgagaactccctgttt
aagagcgaggctcgctatctggtgcgcaggaaggaccctgagctctgggcaaatgtactg
gaagaaaacaacccgttcaggcggcagcttattgaccaggttgtccagacggctttatca
gagacacaggatccagaggaagtttctgtaactgtgaaagctttcatgactgctgatctc
ccaaatgaactgattgagttattggaaaaaattgtcttggataattctgtattcagtgaa
cacaggaatctgcagaatctgctgatcctgactgccattaaggctgaccgcacccgagtg
atggaatacatcaatcggctggataactatgatgccccagatattgcaaacattgccatc
agtaatgagctatatgaggaagcctttgctatattcagaaaatttgatgtcaatacttca
gcaattcaggtgctgattgagcacattggcaacttagaccgtgcttatgaatttgcagag
agatgtaatgaaccagcagtgtggagccaactggccagagcacagctccagaaggacttg
gtgaaggaagccattgactcctatataaaggcagatgatccatctgcctacatggaggtc
gttcaggcagctaacagaaatgataactgggaggacttagtcaagttcttacagatggcc
aggaagaaggctagagagtcttacgtagagacagaacttatttttgctttggcaaaaact
aatcgtctgtcagaactggaggagtttattagtggccctaataatgcccatatacagcag
gtcggtgatcgctgttatgaggagggaatgtatgaagctgcaaaacttctctataacaac
gtatccaattttgctcgcctggcatctaccttggtgcaccttggggagtatcaggcagca
gtggacagtggccgcaaagccaatagcacaaggacgtggaaggaggtctgctttgcttgt
gtggatggaaaagaattccgcttggcacagatctgtggcttacatatagtcatacatgct
gatgaacttgaggagctgattagttactatcaggatcgtggctactttgaagaactgatt
gcccttttggaagctgctttgggcctagagcgtgctcacatggggatgtttactgaactt
gccatcttatactccaaattcaagcctcagaaaatgagggaacatctggagcttttctgg
tctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctgtatgacaagtatgaggagtatgacaatgcaataattactatgatgaat
caccccactgatgcctggaaggaaggccagtttaaagacataattgccaaggtggccaat
gtggagctatattacaaagccttgcagttctacttagactacaaacctctgctgatcaat
gatctcctgcttgtattatctccgcgactggatcacaccaggacagtcaattttttctca
aaggttaatcagctatttctagtaaagccttacctgcgttcagttcagaaccacaacaac
aaaggagttaacgaagctctaaacaaccttttaacagaggaggaagatttccagggtttg
agagcttccattgatgcctatgacaactttgataacataacattggctcagcgtctggaa
aagcatgaactaattgaatttaggcgtattgcagcgtacttgtacaagggtaacaaccgc
tggaagcagagtgtggagctgtgcaagaaagaccgtctgtataaggatgctatgcagtat
gctgcagagtccaaagatgcagagctggctgagaagctgctccagtggttcctggaagaa
ggcaagcaggagtgctttgcagcctgccttttcacatgctatgacttgctgcacccagat
gtagtccttgagctggcatggagacataacatcatggactttgcaatgccttatttcatc
caagtgatgagagagtaccttaccaaagtggataaacttgatgcttctgaaagcctaaga
aaagaagaggaacaagtaactgaacccactccaatagtatttggccagcagttgatgtta
acagcaggccccagtgcagtacctccccaggcaaacttcccatatggatacacagcacca
ggattcacccagccgcctgtttatggtttcaatatgtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   ENSEMBL-TGU (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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