KEGG   Taeniopygia guttata (zebra finch): 100229928
Entry
100229928         CDS       T01082                                 
Symbol
RNF169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
  KO
K20805  E3 ubiquitin-protein ligase RNF169 [EC:2.3.2.31]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tgu04121]
    100229928 (RNF169)
   03400 DNA repair and recombination proteins [BR:tgu03400]
    100229928 (RNF169)
Enzymes [BR:tgu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     100229928 (RNF169)
Ubiquitin system [BR:tgu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    100229928 (RNF169)
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     100229928 (RNF169)
SSDB
Motif
Pfam: zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_4 Prok-RING_4 zf-RING_5 zf-RING_UBOX
Other DBs
NCBI-GeneID: 100229928
NCBI-ProteinID: XP_032602474
Position
1:18935737..18956448
AA seq 654 aa
MAAAGAGGRAVVRGRRRRGRPAAEEEQDAVVLSVAECPVCRQALVEAVTPPCRHSLCLAC
FQRCLQGPGLCCPLCRSRLSTRARRQQAELAATTAAGAAGGERRLPDQDFIFRAPIKLSK
AGELREEYESQLRKLREEKLQEEKTSEDLIHKFILDDMDVGKRKMEEQQKKDESVVLKGN
QDRFPERLSDSENEEPFQGKQTHRSAFVSKTSAYSFAFLSGNLTSKVKRSRSCNDTIQER
SKSRQRSAPAAKTKVLPGGGASTPLLGVLSCAQNNRCRSAPDLTADKRLLLSTVSSLSAL
HRPERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLSRSLQK
PTTYEASPRTLKKWEQIFQERQIKKTLSKATLTSLASEPGEDIVVPDITNSSSCTKEQPQ
AQEDHLPPDTTGEPRPELDFFPSVSEMKLGRGSEKNRGSQALTTDDGAAELDVRSSVTSL
NTRVAEVPDLKVNAFMDKSCLSLGPKTLSRRLMGISASLPDNSTLAVPIKPPGKKQLKYL
NNSELINVENSTCNSVENIIGEQPPLLRRGRKRRCKTKHLEHNGSVKRLRHVAGEVGLPP
EVRDVEQKLQQEEEDRRLALHLQRIFDSENRTVDRRKIRLDRYLLRSKSTLGAK
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggcggcggcgggtgccggcggccgggccgtggtgcgggggcggcggcggcggggccgg
cccgcggccgaggaggagcaggacgcggtggtgctgtcggtggccgagtgcccggtgtgc
cggcaggcgctggtggaggcggtgacgccgccctgccgccactcgctctgcctcgcctgc
ttccagcgctgcctgcagggcccgggcctctgctgcccgctgtgccgcagccgcctctcc
acacgggcccggcggcagcaggccgagctcgcagccaccacggccgccggagcagcaggc
ggggagcggcggctgccggaccaagattttatattcagagcacccattaaattaagcaaa
gcaggagaactccgagaagaatatgaaagccagctaaggaagctgagagaagagaaacta
caagaagaaaagacatctgaggatctgattcacaagttcatcctagatgacatggatgta
gggaaaagaaaaatggaggaacagcagaaaaaagatgaatctgtagtgctgaaagggaac
caagaccgttttcctgaacgtctctcggattccgagaatgaagaaccattccagggcaag
caaacacatcggtcagcttttgtttccaagaccagtgcttactcctttgctttcctttca
gggaatttaacctccaaggtgaagaggagtcggagctgcaacgacaccattcaggagaga
tccaagagcaggcagagatcagccccagccgccaaaacaaaggtgctgcccggaggaggc
gcatcaacaccgctgctcggggtgctgtcgtgcgcgcagaacaaccgctgccggtccgcc
ccggacctgacggccgacaagcgcctgctcctcagcaccgtgtcctccctgtcggccctg
cacaggccggagcgctccatcagccccgagagcaacgacagcatctcagaggagctcaac
catttcaagccgatcgtctgctccccatgcaccccgccaaagaggcttcccgacggcaga
gtcctgagcccactcatcatcaaatccacccccagaaacctgagccggagcctgcagaag
ccaaccacctacgaggccagtcctagaacactgaaaaaatgggagcagatatttcaggag
cgtcagatcaaaaagactctctctaaagcaacccttacgtccttggcttcggagcctggg
gaagacattgtggttcctgacatcaccaactcaagcagttgtactaaagagcagccacaa
gcgcaggaggatcaccttccacctgacacaacaggagagcctcgccctgagctggatttc
ttcccgtcagtcagtgaaatgaagctgggaagggggagtgagaagaacaggggttcacag
gccttaaccactgatgacggtgctgctgaactagatgtgagatcaagtgtaacctcccta
aacacacgagtggctgaagtccctgacctaaaagtgaatgcattcatggacaaatcctgt
cttagtctgggcccaaaaacgctgagcaggagactcatgggcatcagcgcatcgctgcct
gacaacagcacgctcgcagtccccatcaagccaccggggaaaaagcagctgaaatacctg
aacaacagtgagctgatcaatgtagagaacagcacctgcaactccgtggagaacatcatc
ggggaacagccaccgctgctgcggcggggccggaagagacgctgcaaaacaaagcacttg
gagcacaacggctctgtcaaaagactgaggcatgtggcaggggaggtgggcctgcctccg
gaggttcgggacgtggagcagaagctccagcaagaggaggaggacaggaggttggccctg
cacctgcagcggattttcgacagtgagaacaggaccgtggataggcggaaaatccgtctg
gatcggtatctcctgcggtccaagagcactctgggtgccaagtag

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