KEGG   Taeniopygia guttata (zebra finch): 100231066Help
Entry
100231066         CDS       T01082                                 

Gene name
RXRA
Definition
retinoid X receptor, alpha
Orthology
K08524  
retinoid X receptor alpha
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
PPAR signaling pathway
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:tgu00001]
 Organismal Systems
  Endocrine system
   04920 Adipocytokine signaling pathway
    100231066 (RXRA)
   03320 PPAR signaling pathway
    100231066 (RXRA)
Transcription factors [BR:tgu03000]
 Eukaryotic Type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    100231066 (RXRA)
Nuclear receptors [BR:tgu03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   100231066 (RXRA)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
17
AA seq 439 aa AA seqDB search
MATPSLHPSIGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPSTP
SLGFGTSSPQLNSPMNSVTSTEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMLMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt NT seq  +upstreamnt  +downstreamnt
atggccaccccgtccttgcacccgtccatcgggccgggcatcggctcctcgctgggctcg
ccgggccagctgcactcgcccatcagcaccctgagctcgcccatcaatggcatgggcccc
ccgttctccgtcatcagctcccccatgggcccacactcgatgtctgtcccctccacgccc
agcctgggattcggcaccagcagcccacagctcaactcgcccatgaactccgtcaccagc
acagaagacatcaagccacccctggggctcaatggagtcctcaaagtgccagcacacccc
tcaggaacgatggcctccttcaccaagcacatatgtgccatctgcggggacagatcttcg
ggtaaacattacggggtttacagctgtgagggctgcaaaggcttcttcaagcgcacggtg
cggaaggacctgacctacacgtgccgggacaacaaggactgcctgatcgacaagcgccag
cgcaaccgctgccagtactgccgctaccagaagtgtctggccatgggcatgaagagagaa
gccgtgcaggaggagaggcagcgggggaaggaccgcaacgagaacgaggtggagtccacc
agcagcgccaacgaggacatgcccgtggagaagatcctggaggctgagctcgccgtggag
ccaaagacagagacctacattgaggcaaacatgggcctgacccccagctcgcccaatgac
ccggtgacaaacatctgccaggcagcagacaaacagctcttcaccctggtggagtgggcc
aagaggatcccccacttctccgagctgcccctggatgaccaggtcatcttgctcagagca
gggtggaacgagctcctaattgcctccttctcccaccgctccatagccgtgaaggacggg
atcctgctggccacggggctgcacgtgcaccggaacagcgcccacagcgccggcgtcggg
gccatcttcgacagagtactgacagaactggtgtccaaaatgagggacatgctgatggac
aagacagagctgggctgcctgcgagccatcgtcctcttcaaccccgactccaaggggctg
tcgaacccagcagaggtggaggcactgcgggagaaggtgtatgcatcgctagaggcttac
tgcaaacacaaataccccgaccagcccggcaggtttgccaagctcctgctccgcctccca
gcccttcgatccatcggcctcaaatgcctggagcacctcttcttcttcaagctaataggc
gacacgcccatcgacaccttcttgatggagatgctggaagcgccgcaccaaatgacttag

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