KEGG T01082: 100231066

Taeniopygia guttata (zebra finch): 100231066

Entry

100231066 CDS T01082

Gene name

RXRA

Definition

retinoid X receptor, alpha

Orthology

K08524

retinoid X receptor alpha

Organism

tgu Taeniopygia guttata (zebra finch)

Pathway

tgu03320	PPAR signaling pathway
tgu04920	Adipocytokine signaling pathway

Class

Organismal Systems; Endocrine system; Adipocytokine signaling pathway [PATH:tgu04920]
Organismal Systems; Endocrine system; PPAR signaling pathway [PATH:tgu03320]

SSDB

Motif

Pfam:

Hormone_recep Nuc_recep-AF1 zf-C4

Other DBs

NCBI-GI:

449478039

NCBI-GeneID:

100231066

Position

AA seq 439 aa
MATPSLHPSIGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPSTP
SLGFGTSSPQLNSPMNSVTSTEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMLMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT

NT seq 1320 nt +upstreamnt +downstreamnt
atggccaccccgtccttgcacccgtccatcgggccgggcatcggctcctcgctgggctcg
ccgggccagctgcactcgcccatcagcaccctgagctcgcccatcaatggcatgggcccc
ccgttctccgtcatcagctcccccatgggcccacactcgatgtctgtcccctccacgccc
agcctgggattcggcaccagcagcccacagctcaactcgcccatgaactccgtcaccagc
acagaagacatcaagccacccctggggctcaatggagtcctcaaagtgccagcacacccc
tcaggaacgatggcctccttcaccaagcacatatgtgccatctgcggggacagatcttcg
ggtaaacattacggggtttacagctgtgagggctgcaaaggcttcttcaagcgcacggtg
cggaaggacctgacctacacgtgccgggacaacaaggactgcctgatcgacaagcgccag
cgcaaccgctgccagtactgccgctaccagaagtgtctggccatgggcatgaagagagaa
gccgtgcaggaggagaggcagcgggggaaggaccgcaacgagaacgaggtggagtccacc
agcagcgccaacgaggacatgcccgtggagaagatcctggaggctgagctcgccgtggag
ccaaagacagagacctacattgaggcaaacatgggcctgacccccagctcgcccaatgac
ccggtgacaaacatctgccaggcagcagacaaacagctcttcaccctggtggagtgggcc
aagaggatcccccacttctccgagctgcccctggatgaccaggtcatcttgctcagagca
gggtggaacgagctcctaattgcctccttctcccaccgctccatagccgtgaaggacggg
atcctgctggccacggggctgcacgtgcaccggaacagcgcccacagcgccggcgtcggg
gccatcttcgacagagtactgacagaactggtgtccaaaatgagggacatgctgatggac
aagacagagctgggctgcctgcgagccatcgtcctcttcaaccccgactccaaggggctg
tcgaacccagcagaggtggaggcactgcgggagaaggtgtatgcatcgctagaggcttac
tgcaaacacaaataccccgaccagcccggcaggtttgccaagctcctgctccgcctccca
gcccttcgatccatcggcctcaaatgcctggagcacctcttcttcttcaagctaataggc
gacacgcccatcgacaccttcttgatggagatgctggaagcgccgcaccaaatgacttag

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF

DBGET integrated database retrieval system