KEGG   Thermococcus sp. AM4: TAM4_1909
Entry
TAM4_1909         CDS       T01638                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
tha  Thermococcus sp. AM4
Pathway
tha00740  Riboflavin metabolism
tha01100  Metabolic pathways
tha01110  Biosynthesis of secondary metabolites
tha01240  Biosynthesis of cofactors
tha02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:tha00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    TAM4_1909
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TAM4_1909
Enzymes [BR:tha01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     TAM4_1909
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     TAM4_1909
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: EEB73052
UniProt: B7R518
Position
complement(505475..506533)
AA seq 352 aa
MRLALELAKRGEGWVNPNPMVGAVIVKDGEVIGVGWHRRFGEKHAEVNAIEDAKSRGHDV
RGATMYVTLEPCSHWGKQPPCADRIIKEGFKRVVVAMVDPNPLVSGRGIEKMRKAGIEVE
VGVLEDEARRLNEIFIKYVTTKMPFVSIKLALTLDGFIATETGSSQWITGEKARLKVQEL
RRRHMAIMVGAGTVLADNPRLNCRLENCPEKVKVILDRSGRVAEAIRSGRKFRLFEDGRV
IFFTERPELFEGIAEAYPITGPEEILRKLGELGIDSVLIEGGRIACQFLSYADKFYLFYG
PKLFGRGIKPFECLNVRDANEAPLLRIDSIERLGESFLVTAYPGGEDVQRNR
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgcgccttgcattggaacttgcgaagcgcggtgaggggtgggtcaatccaaacccaatg
gtaggcgcggttattgtcaaggacggggaggtaataggcgtcggctggcaccggcgcttc
ggcgagaagcacgcggaggttaacgccatagaggacgcgaagagcagggggcacgacgta
aggggtgcaaccatgtacgtgactctcgagccctgctcccactgggggaagcagccgcct
tgcgccgacaggataattaaagagggcttcaagcgtgtcgtcgtcgcgatggtcgatccc
aatcccctcgtctcgggaaggggaatcgagaagatgaggaaggctggaatcgaggtcgaa
gtcggcgttcttgaagacgaggcaagaaggctcaacgaaattttcatcaagtacgtgact
acaaagatgcccttcgtttcaatcaagctcgccctaaccttggacggcttcatcgcgacg
gagaccggatcctcccagtggattaccggcgagaaggcgagactcaaagttcaggagctc
aggaggaggcacatggcgataatggtcggcgcgggaaccgttttagctgacaacccgagg
ctcaattgcagactggagaactgccccgagaaggtcaaggtaatcctcgaccgctccggc
agggttgccgaggcgataaggtcggggaggaagttccggctttttgaggacggcagggtc
atcttcttcaccgagaggcccgagctcttcgagggaatagcggaagcctaccctataacc
gggccggaggaaatcctcaggaagctcggtgaactcggcatcgacagcgtcctgattgag
ggtggaaggatagcctgccagtttttaagctacgcggacaagttctacctcttctacgga
ccgaagctcttcgggaggggaatcaagcccttcgagtgcttaaacgttagggacgcgaac
gaggccccgctgctgaggattgactcaatcgagaggctcggcgagagcttcctcgtaacc
gcttaccctggtggtgaagatgttcagcggaatcgttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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