KEGG   Thalassospira marina: CSC3H3_11435
Entry
CSC3H3_11435      CDS       T05224                                 
Name
(GenBank) AraC family transcriptional regulator
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
thac  Thalassospira marina
Pathway
thac03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:thac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CSC3H3_11435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:thac03000]
    CSC3H3_11435
   03400 DNA repair and recombination proteins [BR:thac03400]
    CSC3H3_11435
Enzymes [BR:thac01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     CSC3H3_11435
Transcription factors [BR:thac03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    CSC3H3_11435
DNA repair and recombination proteins [BR:thac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CSC3H3_11435
SSDB
Motif
Pfam: Ada_Zn_binding AlkA_N HTH_18 HTH_AraC HhH-GPD TetR_N HTH_Tnp_ISL3 HTH_3
Other DBs
NCBI-ProteinID: AUG53254
Position
complement(2502543..2504090)
AA seq 515 aa
MEQISDDICYTALLARDNRFDGRFYTAVKTTGIFCRPICPAVTPKRQNVEFYPTAEAAMA
HGFRPCLRCRPEAAPGSAAAAGVHATVRRAVRLIEDGALSTGSVEDLADRLGVGARHLRR
IFKDHTGVSPQEHARARRLLRARQLIVDSNLSMTEIADIAGFGSLRRFNDAMKEAYGHAP
TAFRRGLRVIDASPSDHTGNRYNPTTRQKDDMVLRLKPRQPFDRDFILGFFRDRAIQGLE
AIGDDYYARGFCLDNAPGLMICRFEKDGSIEICLRGDDRGSLLEIGGRVRRLFDLDADMS
AITAIFANDPLLAPLVQRRPGLRVPGCWDRFELAMRAVLGQQVSVAAARTLAGRIVARYG
RALPDALVAGTGITHLFPEPAALQGHDLIPIGLTRRRAQTLSDVIDLFAATDFRDQPGSD
ILAQMAKIKGIGPWTLNYFALRGLGDPDAFPAADLGILKGSQIGGGPATAKDLEKHSVVW
RPWRAYAAQYLWSALIPDQGGNDLIEKEDDHENGN
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggaacaaatcagcgatgacatatgttatacggccctgctggcccgtgataaccggttt
gacgggcggttttacactgccgttaaaaccaccggcatattttgtcggcctatctgcccg
gcggtaacgccaaagcggcagaatgtggaattttatcctacggccgaggcggcaatggca
cacggttttcgcccctgcctgcgttgccggcccgaagccgcaccgggcagtgctgccgcc
gccggggtgcacgccaccgttcgccgcgctgttcgcctgatcgaggatggtgccctaagc
accgggtcagtcgaggatttggctgatcgccttggcgtgggcgcacggcaccttcgccgg
atattcaaggatcataccggcgtttccccccaggaacatgcccgtgcccggcggcttttg
cgggcgcggcagcttattgtcgatagtaacctgtcgatgacggaaattgccgatattgcc
ggttttggcagcttgcgccggtttaatgacgccatgaaagaagcctatggccatgcacca
acggcttttcggcgtggtttacgggtcattgatgcatcgccatctgaccataccggaaat
cgctataatccgaccacaagacagaaggacgatatggttttgcgcttaaaaccccgccag
ccctttgaccgtgattttatattggggttctttcgcgaccgcgccattcaggggcttgag
gccattggcgatgattattatgcgcgtggcttctgccttgataatgcaccggggcttatg
atttgccgttttgaaaaggatggcagcatcgaaatatgcctgcggggcgacgatcgcggc
agcctgcttgaaattggcgggcgggtgcgccgcctttttgaccttgatgccgatatgagt
gcaattacagccatttttgccaatgacccgttattggccccgctggtacaaaggcggccg
ggcttgcgtgtgccgggctgttgggacaggtttgaactggccatgcgcgctgttttgggc
cagcaggtatctgttgctgcggctcgtacgctggccggtcgtattgttgcgcgttatggg
cgtgcactgcctgatgcactggttgctggtactggaattacgcatctgtttcccgaaccc
gcggctttgcagggccatgatctgatccccatcgggctgacccgtcggcgtgcgcagaca
ttatccgatgtaattgacctgtttgctgcaacagattttcgcgaccagcccggcagcgat
attttggcgcagatggcgaaaatcaagggcattggtccctggacgcttaactattttgcg
ctgcgggggctgggcgaccccgatgccttcccggcggctgatctgggcattttaaagggg
tcgcaaatcggcggtggcccggcaacggccaaagaccttgaaaagcattcggtggtgtgg
cggccctggcgggcctatgccgcgcaatatttgtggtcggcacttatcccggatcaaggt
gggaacgacctgattgaaaaggaagatgaccatgaaaacggtaattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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