KEGG   Candidatus Endolissoclinum faulkneri L2: A1OE_1263
Entry
A1OE_1263         CDS       T02365                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thal  Candidatus Endolissoclinum faulkneri L2
Pathway
thal03410  Base excision repair
thal03430  Mismatch repair
thal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A1OE_1263 (recJ)
   03430 Mismatch repair
    A1OE_1263 (recJ)
   03440 Homologous recombination
    A1OE_1263 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thal03400]
    A1OE_1263 (recJ)
DNA repair and recombination proteins [BR:thal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     A1OE_1263 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     A1OE_1263 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      A1OE_1263 (recJ)
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH ThiG GLUCM-like_C
Other DBs
NCBI-ProteinID: AFX99437
UniProt: K7YPK7
Position
complement(1148687..1150480)
AA seq 597 aa
MPQSNAFLGVEQSLTLRRWVLHGNGRIKNVDKIGWAIAQRFALPETVGHIIAQRGIELDA
VESFLQPTLKAELPDPKRFIDMDFAVNRLVEAVLLGQVIGLFADYDVDGATSAASMAKYF
RAVDASVVIYVPDRIKEGYGPNMPALQNLVMQGAAVIVCLDCGILATKTLAQAMRDGIDV
IVVDHHLAGSELPPAIAVVNPNRLDEVPGFGYLAACGVTFLTIVAVNRALRDKGWFTHHV
EPDLRLILDLTAMGTVCDVVPLTGLNRAFVAQGLKIMARRSNIGLAALLNIVGLDSKPTA
YHLGFVLGPRINAGGRMGKADLGAKLLSTNDTIEAHQIAKILDYCNNKRKIIESRFLRNA
IAQAENERNSPVLVVSGDRWHPGVIGIIASRLKDRFQLPTCVISIDDKGIGRGSGRSVPG
IDLGAAIIAACRVGLLESGGGHAMAVGFTVAASRIGEFTAFLIERFALSNSCCLPLMPAE
LSVDAVLTPSGATIDLARAISLLAPFGIGNVEPRFVVSHAKVESSRIVGNQHIRCNLVGY
DCAQVQSIAFHAMDNAIGSSLLQVHKDPLYVAGYLRLNNSCGNYKVQLVIDDVAQAV
NT seq 1794 nt   +upstreamnt  +downstreamnt
gtgccgcaatccaatgcatttctaggtgttgaacaatcactcactttacgtcgttgggta
ttgcacggcaacggtagaataaaaaatgtggataaaattggttgggcaattgcacagcgc
tttgctcttcccgaaactgtaggacatattatagctcagcgaggcattgaattggatgcg
gttgagtcttttttgcaaccaaccttaaaagctgaacttcctgatcccaaacgatttatt
gatatggactttgccgtcaataggttggttgaagcggtacttttaggacaggttatcggg
ttatttgcggattatgacgtagatggtgctacttcggcagctagtatggccaaatacttt
cgcgcggttgatgcctcagtggtcatttatgttcctgatcgtattaaggaaggttatggt
ccaaatatgccagccttacagaatctagttatgcaaggtgctgcagtaatagtttgcttg
gattgtggcatcctcgctactaaaactctagctcaggcaatgagggatgggatagatgta
attgttgttgatcatcatttagctggttcagagctaccgccagctatagcagttgttaat
cctaatcggctagatgaagtaccaggatttggttatttggcggcatgtggtgttactttt
ctgactatagtagctgttaatcgcgcattacgagataagggttggtttactcatcatgtt
gaaccggatctaagacttattcttgatttaactgctatggggactgtttgtgacgttgta
ccgcttaccggacttaatcgggcttttgttgctcaaggtttgaagatcatggctaggcgt
tcaaatataggattagcagccttactgaatattgttggactcgattctaagccaactgct
tatcatctaggctttgttttgggcccgagaatcaatgctggcggacgtatgggtaaagct
gatcttggcgctaaattgctttctactaatgataccattgaagctcatcaaatcgctaaa
atactagattactgtaataataaacgtaaaataattgaatcgagatttttgagaaatgct
attgctcaagcggaaaacgagaggaattcaccagtgcttgtagtctcgggagatagatgg
catcctggtgtgattggcattattgccagccgcctaaaagatcgatttcaacttcctact
tgtgtgattagtattgatgataaaggtattggaaggggctctggccgctcggtgcctggt
atagatttgggagctgcgattattgccgcttgtcgggtgggattattagagagcggtggt
gggcatgctatggctgtaggctttactgttgctgcaagtcgtattggtgaatttactgcc
ttcctgattgagcgttttgctttatcaaatagttgttgcttgcctttgatgcctgctgaa
ttatcggtggatgcggttttaaccccaagcggggctacgatagacttagctcgtgcgata
tcactacttgctccatttggtattggtaatgtggagccgcgttttgtagtatctcatgct
aaagttgaatccagtcgtatagttggcaaccaacatataagatgtaatttggttggttat
gattgcgcccaagtacaatctattgctttccatgctatggataatgctattggttctagc
ttgttgcaagtgcataaagaccctttatatgtagcagggtacttaagactcaataattct
tgcggtaattataaagttcagcttgttatagatgatgttgctcaggctgtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (122)   
   KEGG ORTHOLOGY (1)   
   RefGene (119)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (134)   

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