KEGG   Thermofilum adornatum 1910b: N186_03870
Entry
N186_03870        CDS       T02802                                 
Name
(GenBank) RNA-binding protein
  KO
K12589  exosome complex component RRP42
Organism
thb  Thermofilum adornatum 1910b
Pathway
thb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N186_03870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thb03019]
    N186_03870
Messenger RNA biogenesis [BR:thb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     N186_03870
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     N186_03870
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: AGT35135
UniProt: S5Z738
Position
674733..675575
AA seq 280 aa
MSEERIYLPSIKRDVILASLAKGERLDGRKFDQYREIRLEKGIVGKAEGSARVYIGSTQV
IAGVKLSIGNPFPDTPNEGVQIVNAELSPLASPLFEWGPPGEEDIELARVIDRGLRSART
VDLSKLVIIPGTKVWTLYIDIYPLDHDGNIIDAAGLAALLALLDTKVPKTTVDNGKITVL
EEKDPLPVTNLVIYVTVAKIDEYLILDPTLEEELAADAKITFGVTEKGEICAIQKSGEGS
FKPEEVLKARDLAINASKQLFEAVKKTVGLADTPKQAQQA
NT seq 843 nt   +upstreamnt  +downstreamnt
atgtctgaggaaaggatatatctaccctccataaagcgggacgttatacttgcctcacta
gcaaagggcgagagactagacgggagaaaattcgaccagtaccgcgaaataaggctggaa
aaaggcatagtgggcaaagccgagggctccgccagggtatacataggatccacacaggtt
atcgccggtgtaaaactatctataggcaaccccttccctgacacgccaaatgaaggagtc
caaatagtaaacgccgagctatcacccctagcgtccccgctcttcgagtgggggccccca
ggcgaagaagatatcgagcttgcaagagtcatagacagaggccttcgaagcgcccgcacc
gtagacctctccaaacttgtaataataccgggcacgaaggtctggactctctacattgac
atataccccttagaccacgacggaaacatcatagatgcggcgggcctcgctgccctcctt
gcactcctagacacaaaggtcccaaaaaccacagtagacaatggaaagataactgtctta
gaagaaaaagacccgctacccgtaaccaatcttgtaatctatgtaaccgtcgcaaagata
gacgaataccttatcctcgaccctacactcgaagaagaacttgcagccgacgcaaaaatc
accttcggagtaacggagaaaggagaaatatgcgcaatacagaagagcggcgagggatcc
ttcaagccagaagaagtcctcaaggcaagagacctagcgataaatgcctcgaagcaactt
tttgaagccgtcaagaaaactgtaggcctcgcagacacgcctaagcaagctcagcaagcg
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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