KEGG   Thermofilum adornatum 1910b: N186_05120
Entry
N186_05120        CDS       T02802                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
thb  Thermofilum adornatum 1910b
Pathway
thb03030  DNA replication
thb03410  Base excision repair
thb03420  Nucleotide excision repair
thb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:thb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    N186_05120
   03410 Base excision repair
    N186_05120
   03420 Nucleotide excision repair
    N186_05120
   03430 Mismatch repair
    N186_05120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thb03032]
    N186_05120
   03400 DNA repair and recombination proteins [BR:thb03400]
    N186_05120
Enzymes [BR:thb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     N186_05120
    6.5.1.6  DNA ligase (ATP or NAD+)
     N186_05120
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     N186_05120
DNA replication proteins [BR:thb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    N186_05120
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     N186_05120
DNA repair and recombination proteins [BR:thb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     N186_05120
   NER (nucleotide excision repair)
    Other NER factors
     N186_05120
   MMR (mismatch excision repair)
    Other MMR factors
     N186_05120
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: AGT35370
UniProt: S5Z7M5
Position
904254..906065
AA seq 603 aa
MSQTGEDLPYSVLADFYEKIESITSRIAMTDYLVALFKKTPPSIIDKVIYLTQGQLRPDY
EGVELGVAEKLALRALARATGRHVKDVEDMYKQTGDIGLLAEKLMSTSRTGGLLDFIGTM
EPKKELTVSQVYNALLRIAQATGEGAQETKINTLVSLLKDAKPKEARYILRTVLGRLRLG
IADMTILDALAIAFTGSKNTRDIVEKAYTKHPDLGYIAKLLASQGIDAVASLKIEVGVPI
LPMLAERLSDPDEILQKLGGKCLAEYKYDGERVQAHKKGEKVWLFSRRLENITHHYPDVV
EYMKQLKADEAIVEGEIVAYNPDTGEMLPFQELMHRRRKYDVDKAMKEYPVRVYLFDIVY
LSGRELIDEPLPDRRQNLEKIVPEGQENLLLSSAKIIDNSKDLLHFFEQAISDGCEGIMC
KSIGPDSVYQMGARGWLWIKFKRDYRLEMTDTVDLVVVGAFKGRGKRAGTYGALLMAAYD
PETDTFKTVCKVGSGFTDEDLANLPKMLEPYILPHRHPRVFSKMEADVWFVPAVVLEIIG
AEITLSPLHTCALNKIEEGVGLAIRFPRFTGRYRFDKKPEQATTEAELIEMYKSQRKTII
QQS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgagtcaaaccggagaagatttaccatattcggttctagcagacttctacgaaaaaatc
gagtctataaccagcaggattgccatgacagattaccttgttgcacttttcaagaaaaca
ccccccagcataattgacaaggtcatatacctgactcagggacagctccgtccagactat
gagggcgtagagctaggagtagccgagaaactggctctaagagctttggcaagagccacc
ggtagacatgtgaaagacgtagaagatatgtataagcaaactggggacatagggcttctc
gccgaaaaactcatgtctacttcccgcaccggtggactactagacttcattggaaccatg
gagcccaaaaaagagctaacagtttcacaagtctacaacgcgctcctaagaattgcgcag
gcaaccggtgaaggagcccaggaaacaaaaataaatacgcttgtatctttgcttaaggat
gctaagccaaaagaagcaagatatattcttcgaacagtcctgggaagactaaggctaggc
atagctgacatgacgatacttgacgcactggcaatagcctttacagggtctaaaaatacc
agggacatagtcgagaaggcatacactaagcatcccgacctcggctacatagcaaagttg
ctagcctcacagggaatagatgcggtggcatcgctcaagatagaagtaggtgtcccaata
ctaccaatgctggcagagagactaagcgacccagacgaaatactgcaaaagcttggcggc
aaatgtcttgcagagtacaagtatgacggggaaagagtccaagcccacaaaaaaggcgaa
aaggtctggctgttcagcagacgcctagaaaacattacacatcactatccggacgtcgta
gaatatatgaagcaacttaaagcggacgaagcgatagttgaaggagaaatagtagcctac
aaccctgacacaggcgaaatgctacctttccaggaactcatgcacaggagacgaaaatac
gacgtagacaaagccatgaaagagtatcctgtaagggtctatctctttgatatcgtctac
ttgtctggacgagaactcattgatgaacctcttcccgacaggagacagaatcttgaaaaa
atagttccagaaggccaggaaaacctcttgttaagtagcgctaaaatcattgacaactcc
aaggatcttttgcacttctttgaacaggctataagtgatggatgcgagggtataatgtgt
aaatccattggtccggacagcgtctaccagatgggtgcaagaggctggctatggataaaa
ttcaaacgggactataggcttgagatgaccgacactgtagacctggtcgttgtcggcgcc
ttcaagggaagaggcaaaagagcggggacttatggtgcgttgctcatggcagcatacgat
cctgaaacagacaccttcaagactgtatgcaaggttggttcaggctttacagatgaggat
ctagcaaacctgcctaaaatgcttgaaccatacatcttgccgcataggcatccaagagta
ttttccaaaatggaggcagacgtctggtttgttccagccgttgtccttgaaataattggc
gcggaaataactctaagcccattacatacttgtgcattaaacaaaatagaagaaggcgta
ggtctagccataaggtttccacgcttcactggtagatacaggtttgacaagaagccagaa
caagctacaaccgaggccgagctaatcgagatgtataagtcccagagaaaaacaataatc
cagcagtcctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (7)   
   KEGG ENZYME (3)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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