KEGG   Thermus sp. CCB_US3_UF1: TCCBUS3UF1_16440
Entry
TCCBUS3UF1_16440  CDS       T01866                                 
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
thc  Thermus sp. CCB_US3_UF1
Brite
KEGG Orthology (KO) [BR:thc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:thc03016]
    TCCBUS3UF1_16440
Enzymes [BR:thc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     TCCBUS3UF1_16440
Transfer RNA biogenesis [BR:thc03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    TCCBUS3UF1_16440
 Prokaryotic type
    TCCBUS3UF1_16440
SSDB
Motif
Pfam: TruD DbpA
Other DBs
NCBI-ProteinID: AEV16685
UniProt: G8N9A9
Position
1644684..1645742
AA seq 352 aa
MDLVYRPERYPFLTPDLPGVGGTLRLLPQDFQVEEVPAYLPQGEGEHLYLLLEKEGLTTR
QVLEFLRDQVGVPEKEIGVAGLKDKHARTRQWFSIPKRYEDALCLLEGLRGVRLLDAGLH
ANKLRTGHLKGNRFRILIRGGGPKERAEAILRVLQAKGVPNYYGPQRFGLGGLNPVRGYE
LVKGGKGRGSPWLKRFLVGSLQSLLFNDWLALRLERGLYDRVIPGDWAKKHATGGEFLVE
RPEEAERALRLEISATGPLFGKKYPEAQGEARALEDEVLVRYGLRREDFALRRGARRPIR
VPLEEWRVEEAPEGLWLSFFLPKGSYATSLLREVMKVEVDAGDSPEGEEGEG
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggacctcgtctaccgccccgaacgctaccccttcctcaccccggacctccccggggta
gggggcaccctacgcctcctcccccaggacttccaggtggaggaggtccccgcctactta
ccccagggcgaaggggaacacctctacctcttgctggagaaggagggcctcaccacccgc
caggtcctggagttcctgcgggaccaggtgggggtgccggagaaggaaatcggggtggcc
gggctcaaggacaagcacgcccgcacccgccagtggttctccatccccaaaaggtacgag
gatgccctgtgcctcctggaagggctccggggcgtgcggcttctggacgcggggctccac
gccaacaagctccgcaccggccacctcaagggcaaccgcttccgcatcctcatccgggga
ggcgggcccaaggagcgggccgaggccatcctgagggtccttcaggccaagggggtaccc
aactactacgggccccagcgcttcggcctggggggcctgaaccccgtgcgggggtacgag
ctggtcaaggggggcaagggccggggaagcccctggctcaagcgcttcctggtgggaagc
ctgcagagcctcctcttcaacgactggctggccctgcgcctggaacggggcctctacgac
cgggtgatccccggggactgggccaaaaagcacgccaccggcggggagttcctggtggag
cgcccggaggaggcggaaagggccctccgcttggagatcagcgccaccggccccctcttc
ggcaagaagtaccccgaggcccaaggcgaggcccgggccctggaggacgaggtcctggtc
cgctatggcctaaggcgggaggactttgccctgcgccggggggcgaggcggcccatccgg
gttcccttggaggaatggcgggtggaggaagcccccgaggggctttggctcagcttcttc
ctgcccaagggctcctacgccaccagccttctgcgggaggtgatgaaggtggaggtggac
gcaggggatagcccggaaggcgaggagggggagggctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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