KEGG T01588: GQS

Thermococcus sp. 4557: GQS_07890

Entry

GQS_07890 CDS T01588

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

the Thermococcus sp. 4557

Pathway

the03030	DNA replication
the03410	Base excision repair
the03420	Nucleotide excision repair
the03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:the03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:the03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:the03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:the03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2 Peptidase_S7 UCR_UQCRX_QCR9 TPR_1

Other DBs

NCBI-GI:

341582659

NCBI-GeneID:

11016253

UniProt:

G0HLK1

Position

1501037..1502716

AA seq 559 aa
MKYAELADLYRRLEKTTLKTLKTKFVSDFLKKAPDELLDIIPYLILGKVFPDWDERELGV
GEKLLIKAVSMATGVPEREIENSVRDTGDLGESVALALKKKKQKSFFSQPLTIKRVYDTF
MKIAEASGQGSQDRKLKYLANLFMDAQPEEGKYLARTVLGTMRTGVAEGLMRDAIASAFG
VKAELVERAYMLTSDFGYVARVAKLEGNEGLSKVRIQVGKPIRPMLAQNAANVKEALVEM
GGKAAFEVKYDGARVQVHKDGDRVVIYSRRLENVTRSIPEVVDAVLESVKPEKAIVEGEL
VAVGEGGKPRPFQYVLRRFRRKYNIEEMVEKIPLELNLFDVLYVDGDGMIDTPFSERRKK
LEEIISQNERIRLAEQLVTTSADEAEEFYQRALELGHEGLMAKRLDSVYEPGNRGKKWLK
IKPTMEDLDLVIIGAEWGEGRRAHLLGSFLVAAFDPHSGEFVPVGKVGSGFTDEDLAEFT
RMLKPLIVREEGKYVEIEPKVVIQVTYQEIQKSPKYESGFALRFPRYVALREDKSPEEAD
TIERIAQLYEFQERFKAKR

NT seq 1680 nt +upstreamnt +downstreamnt
atgaaatacgccgaactggccgacctttacagacgcctggaaaaaacgaccctcaaaacc
ctgaagaccaaattcgtctccgattttctcaagaaggcacccgatgaactcctcgacata
atcccctatctcattctgggaaaggtctttcctgactgggacgagagagagcttggagtc
ggtgagaagctcctcataaaggccgtttccatggccaccggcgttcccgagcgggagata
gagaactccgtgagggacaccggcgacctcggtgagagcgttgccctggccctgaagaag
aaaaaacagaagagcttcttctcccagccgctgaccataaagcgcgtttacgacaccttc
atgaagatagccgaggccagcgggcagggaagccaggacaggaagctgaagtacctcgcc
aacctcttcatggacgcccagccggaggagggcaagtatctcgccaggacggttctcgga
accatgcgcaccggtgttgcggagggactcatgagggacgccatagcgagcgcattcggc
gtcaaggccgagctcgtcgagagggcctacatgctcacgagcgacttcggctacgtcgcg
agggtggccaagctcgagggcaacgagggcctctcaaaggtcagaatccaggtgggcaag
cccataaggccgatgctcgcccagaacgcggccaacgtgaaggaagctttggtagagatg
ggcggaaaggccgcgtttgaggtaaagtacgatggagcgcgcgttcaggttcacaaagac
ggcgatagggttgttatatactcccgcaggctggagaacgtgacgaggtccatcccggag
gtcgttgatgccgtcctggagagcgtaaagcccgagaaggccatcgtggagggtgaactc
gttgccgtcggcgagggtgggaagcccaggcccttccagtacgtgctgaggcgcttcagg
aggaagtacaacatcgaggagatggtggagaagatcccccttgagctgaacctcttcgac
gtcctctacgttgacggcgatgggatgatagacacgcccttctccgagcgcaggaagaag
ctggaagagataatctcccagaatgagcggataaggctggctgaacagctggtaaccacc
agcgccgacgaggctgaggagttctaccagcgcgcccttgagctcggccacgaggggctg
atggcgaagcgcctggattcggtttacgagcccggaaacaggggcaagaagtggctcaag
ataaagcccacgatggaggacctcgacctcgtcataatcggcgccgaatggggcgaggga
aggcgtgcacacctcctcggctccttcctggtcgcggccttcgacccgcacagcggcgag
ttcgtcccggtcggaaaggtcgggagcggcttcaccgatgaagaccttgccgagttcacc
aggatgctcaagcccctcatagtccgcgaggagggcaagtacgtcgagatagagccgaag
gtcgttattcaggtcacctaccaggagatacagaagagcccgaagtacgagagcggcttt
gcgctgaggttcccacgctacgtggccctgagggaggacaagagtcccgaggaggcggac
acgatcgagcgcatagcccagctctacgagttccaggagaggttcaaggcgaagaggtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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