KEGG   Thermococcus sp. 5-4: CDI07_03930
Entry
CDI07_03930       CDS       T05088                                 
Name
(GenBank) mRNA surveillance protein pelota
  KO
K06965  protein pelota
Organism
thh  Thermococcus sp. 5-4
Brite
KEGG Orthology (KO) [BR:thh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thh03019]
    CDI07_03930
Messenger RNA biogenesis [BR:thh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     CDI07_03930
SSDB
Motif
Pfam: eRF1_1 eRF1_3 eRF1_2 baeRF_family10 Host_attach baeRF_family12 baeRF_family5
Other DBs
NCBI-ProteinID: ASA77478
UniProt: A0A1Z2TLY8
Position
703735..704808
AA seq 357 aa
MQIIHQDVKEGKIKVKAETLDDLWHLYHIIDPGDTVYAKTLRKQAQRSDSLRAEKVEVIP
VFLGVKAEKINFHKFANQVRVTGPIVYASRDDVPLGKYHTIAIEEGTVVTIQKPRWKEHH
IERLKEAVEASKRARVMIVVIDDGEADMAIIREYGVEILKGIRYNLGGKRYNTNRESEEK
KFFHDVAKSMDEIINRESIERAIVAGPGFVKEEFYKFLRENYPELAKKVVIEDTSVTGRT
GIYEVIRRGTVDKVYHENRVAKEVQLVEKVLENVARNNGLAAYGLKEVEEAVNYGAVETL
LVLDELLKGEHRDKIEELMDAVRYSRGEVVVVSSEHEGGDKLKALGGLAALLRFRVK
NT seq 1074 nt   +upstreamnt  +downstreamnt
gtgcagataatccaccaggacgtcaaggagggcaagataaaggtcaaggccgagacgcta
gatgacctctggcacctctaccacatcatagaccccggcgacaccgtttacgcgaaaacc
ctcagaaagcaggcccagcgctcggactcgctgagggctgagaaggtcgaggtaattccg
gtcttcctcggagtcaaggccgagaagataaacttccacaagttcgccaaccaggtccgc
gttaccggcccgatagtgtacgccagcagggacgacgttcccctaggcaagtaccacacg
atagccatcgaggaggggacggtggtcacgatccagaagccccgctggaaggagcaccac
atcgagcgcctcaaggaggccgttgaggcttccaagagggcaagggtcatgatagtcgtt
atagacgacggcgaggcggacatggcgataatcagggagtacggcgtcgagatactcaag
gggatacgctacaacctcggcgggaagcgctacaacaccaaccgcgagagcgaggagaag
aagttcttccacgacgtggcgaagagcatggatgagataatcaaccgcgagagtatagag
agagctatagttgcaggcccgggcttcgtcaaggaggaattctacaagttcctgcgcgag
aactaccccgagctggcaaagaaggtggtaatcgaggacacgagcgtgaccgggaggacg
ggcatctacgaggtcatacggcgcggaacggttgacaaggtctaccacgagaatcgcgtg
gccaaggaagtccagctcgtcgagaaggtgcttgagaacgtggcgaggaacaacggtctg
gccgcttacggtcttaaagaggtcgaagaggccgtgaattatggagctgttgagacgctc
ttggttctcgacgagctcctgaagggcgagcacagggataagatagaggagctcatggac
gcggttcgctattcgaggggcgaggtcgttgtggtcagctccgagcacgagggaggcgac
aagctgaaggctctgggcggtctggcggcgctgctgaggttcagggtgaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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