KEGG   Thiomonas arsenitoxydans: THI_0400
Entry
THI_0400          CDS       T02347                                 
Name
(GenBank) putative UDP-N-acetylmuramoylalanine--D-glutamate ligase (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) MurD
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
thi  Thiomonas arsenitoxydans
Pathway
thi00470  D-Amino acid metabolism
thi00550  Peptidoglycan biosynthesis
thi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:thi00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    THI_0400
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    THI_0400
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:thi01011]
    THI_0400
Enzymes [BR:thi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     THI_0400
Peptidoglycan biosynthesis and degradation proteins [BR:thi01011]
 Precursor biosynthesis
  Amino acid ligase
   THI_0400
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C F420_oxidored
Other DBs
NCBI-ProteinID: CAZ87150
UniProt: D6CRA9
Position
407849..409393
AA seq 514 aa
MNLNSLSVLVLGLGESGLAMARWCAAQGARVRVADSRSAPPGLAALQREVPSAQVHCGNL
SADLLGDAQLLLRSPGIAPHAAEFAALTQAAAERGVPMAGELHLFQWALDALREERGYAP
KIVAITGTNGKTTVTRLTGLMLERAGWSVAVAGNISPSMLDVLQARLQADDLPAAWVLEL
SSFQLHGMEGFAADAATVLNITQDHLDWHGDMTAYAADKANIFGNQSAQGVMVLNCDDPQ
VLAMQRPGRKLRRFGLSAPQQPGDWGVVREGGIDWLARALPEEDSPRNRRGAAISPQGAG
QGLGRPGALPEARLQMQRLMPAEALRIQGAHNVANALAALALGDAVGAPLAPMLHALREY
RGEPHRMQTVAVIDGVRWIDDSKGTNVGATVAALAGMETPVVLIAGGDGKGQDFSPLRAQ
AARLRAAVLIGRDAQAIAAELQGLAPTVFTQSLEQAVQRAATLAKTGDAALLSPACASLD
MFRNYAHRAEVFVAAVRNLAEQRGQVWNEGADHA
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgaacctgaactcactctccgttctcgtgctcggtctgggcgaatccggcctggcgatg
gcgcgctggtgtgcggcgcaaggcgcgcgggtgcgcgtggccgacagccgcagcgcgccg
cccgggctggctgcgctgcagcgcgaagtgccatcggcgcaggtgcattgcggcaacctg
agcgccgacctgctgggcgacgcgcaactgctgctgcgcagccccggcattgcaccgcac
gcggccgagtttgccgcgctcacacaggcagccgccgaacgcggcgtgccgatggccggt
gagctgcatctgttccagtgggcgctcgacgcgctgcgcgaagagcgaggctatgcgccc
aagatcgtcgccatcaccggcaccaacggcaagaccaccgtcacgcggctgaccgggctg
atgcttgagcgcgcgggctggagcgtggcagtggcgggcaatatttcgccgtccatgctc
gacgtgctgcaggcccggcttcaggccgacgacctgcccgcagcctgggtgctcgagctc
tccagcttccagcttcatggcatggagggcttcgctgccgacgccgccacggtgctcaac
atcacccaggaccatctcgactggcacggcgacatgacggcctacgccgccgacaaggcc
aacatcttcggcaatcagagcgcgcagggcgtcatggtgctcaactgcgacgatccgcag
gtgctggccatgcagcgcccggggcgcaagctgcggcgctttggtttgtcggcgccgcaa
caacccggagactggggcgtggtgcgcgaaggcggcatcgactggctggcgcgcgccctc
ccggaagaggactccccccgaaatcgccgcggtgcggcgatctccccccagggggccggg
caaggcttggggcggcccggcgccttgcccgaggccaggctccagatgcagcgtttgatg
cccgcggaagccctgcgcattcagggcgcgcacaacgtcgccaatgccctggccgcgctg
gcgctgggcgatgccgtgggcgcgccgctcgcgcccatgctgcatgccctgcgtgagtat
cgcggcgagccgcatcgcatgcagaccgtggcggtgatcgacggcgtgcgctggatcgac
gacagcaagggcaccaatgtcggcgctacggtggcggcactggcgggcatggaaacgccg
gtggtgctgatcgccggtggggacggcaaggggcaggacttttcgccgctgcgcgcgcag
gcagcccgcttgcgcgctgcggtgctgattggccgcgatgcgcaggccatcgccgcggag
ctgcaggggctggcccccaccgtattcacgcagtccctggagcaggctgtgcaacgcgcc
gccacgttggcaaagaccggcgatgcggcgctgttgtcacccgcttgcgccagtctcgac
atgttccgcaactatgcgcatcgcgccgaggtgtttgtcgctgcggtccgcaatctggcc
gagcagcgcggacaagtctggaacgaaggggccgaccatgcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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