KEGG T02347: THI

Thiomonas sp. 3As: THI_2564

Entry

THI_2564 CDS T02347

Definition

putative ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

thi Thiomonas sp. 3As

Pathway

thi03410	Base excision repair
thi03420	Nucleotide excision repair
thi03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:thi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:thi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:thi03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M mRNA_cap_enzyme

Other DBs

NCBI-GI:

410694363

NCBI-GeneID:

13879715

UniProt:

D6CV64

Position

2519276..2520166

AA seq 296 aa
MRPSPRRFPAPTLAGLRPLLLCGVLLTNLPWAQAEAPSPPPPALLLAETASSQLDPAPYW
VSEKLDGVRAFWDGRVLRFRSGNPVPAPAWFTAALPSQPLDGELWIARESFDQVSGIVRS
NPPNDRDWKQVRYMVFELPNAPGSFTERIARMRTLVERAQAPWLQMVPQFRVPNSAALKQ
QLDKIVKAGGEGLMLHRADAPYQTGRQDVLLKLKPWQDAEATVIGYTPGKGKYAGLTGAL
NMQMPDGKIFRIGSGLSDALRRNPPPIGAQITYRYQSLTPSGLPRFARYLRVREKE

NT seq 891 nt +upstreamnt +downstreamnt
atgcgtccttcgccacgccgctttccagcacccactctcgctgggctgcgcccgctgttg
ctgtgtggcgtgctgctgacgaatctgccctgggcgcaggccgaagcgcccagcccgcca
cccccggctctgttgctggccgaaaccgcctcaagccagctcgatccggcgccctactgg
gtgagcgaaaaactcgacggcgtgcgcgccttctgggacggtcgggtgctgcgttttcgc
agcggcaacccggtgcccgctccggcgtggttcaccgccgcgctgccctcgcagccgctg
gacggcgagctgtggatcgcccgcgaaagcttcgaccaggtctcgggcatcgttcgcagc
aacccgcccaacgaccgcgactggaagcaggtgcgttacatggtgttcgagttgcccaat
gcgccgggcagcttcaccgagcgcatcgcccgcatgcgcacgctggtggaacgggcgcag
gcaccctggctgcaaatggtgccgcagttccgcgtgcccaactccgccgcgctcaagcag
cagctcgacaaaatcgtgaaggcaggcggcgagggcctgatgctgcaccgcgccgatgcg
ccgtatcaaaccggccgtcaggatgtgctgctcaagctcaagccctggcaggacgccgaa
gccaccgtcatcggctacacgccgggcaaaggcaaatatgcggggctgaccggcgccctg
aacatgcagatgcccgacggcaagatctttcgcatcggttccggcctgagcgacgccctg
cgccgcaacccgccgcccatcggcgcccagattacctaccgctaccagtcgctcacgccc
tcgggccttccacgttttgcgcgctaccttcgcgtgcgcgagaaagaatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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