KEGG   Tarenaya hassleriana (spider flower): 104817957
Entry
104817957         CDS       T04125                                 
Name
(RefSeq) polyadenylate-binding protein 6
  KO
K13126  polyadenylate-binding protein
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03015  mRNA surveillance pathway
thj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104817957
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104817957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thj03019]
    104817957
   03041 Spliceosome [BR:thj03041]
    104817957
Messenger RNA biogenesis [BR:thj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     104817957
   mRNA cycle factors
    Stress granule specific factors
     104817957
Spliceosome [BR:thj03041]
 Complex C
  Other components
   Complex C specific factors
    104817957
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 104817957
NCBI-ProteinID: XP_010545662
Position
Unknown
AA seq 542 aa
MAGAKQETALFGSPQRSVKKASLYVGDLCADVTEEDLIAKFSSTVPVVSAHLCRCSATGK
SLRYGYVNFDSRFNASNAMACLNHTDLKGKPMRIMWFQKDQSQRRSGIGNLFVKNLGSSI
TGGCLERIFSPFGTILSCKVAEENGQSKGFGFVQLDSEQSAASARSALHGSLIDGKKLFV
AKFIKKTERAAKSGKNDFTNLYVKNLDEDVTEDFLLETFAKYGGVSSVSVTRDGAGKSRG
FGYVSFFEPESARNATEALNGAFLGSKNLFVGRAQTKAERTEMLKYELKEKFISGFKTLK
RFNLYVKDLSESVDETRLREIFGRYGNVVSAKVMRHENGLSKGFGFVCFSNREESKQAKR
DLDGYLVDGKSLVVRVAERKEDRVKRLQKFFTEPSGQVPYGSVPNLPVGFPVQSHNQPMP
VSYAYLQPFHVGRSSFYMGSQAFLPNYVTSYIPAGESQSKKNQPQDEVNRRTVFSKSKGK
TRNVGSRKHRFGGKGNGVGDAEMPSRASKSTVSLDEATSVLKAVLLKSSHACGSESRKFQ
TN
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggcgggcgcgaagcaagaaacggcgctgtttgggagccctcaacgctccgtgaagaaa
gcttcgctttacgtcggcgatctttgtgccgacgtgacggaagaagatctcatcgccaaa
ttctcctcgacggttcccgtcgtctccgcccatctctgccgctgctccgccaccggaaaa
tcccttcgctacggctacgtcaacttcgattcccgcttcaatgcatcaaatgctatggct
tgcttgaaccacactgacttgaagggaaaaccgatgaggataatgtggttccagaaggat
cagtcacagcgtcggagtggaatcggcaaccttttcgttaaaaacctcggcagttcaatc
accggtggttgcttagagcgtatcttcagccccttcgggaccatactttcctgcaaagtg
gccgaggaaaacgggcagagtaaaggtttcggcttcgtccagctcgattcagaacaatcc
gctgcatccgctcggtctgctctccatggctctctcatcgacgggaagaaactatttgta
gcgaaattcatcaagaagactgaaagggcagcaaagtcggggaaaaatgatttcacaaac
ctttatgtgaagaatctggatgaagatgtgacggaggattttctgctcgaaacgtttgcc
aaatacgggggagtttctagcgtttcggtcacgagggatggagccgggaaatcgagaggt
ttcgggtatgtgagtttcttcgagccagaaagtgcgaggaatgcgacagaggccctgaat
ggagcatttcttggatccaagaatttgtttgtcggaagggctcagaccaaagctgaaagg
acagagatgctgaaatatgaactcaaggagaagtttatttccgggtttaagacgttgaag
cggttcaatctgtacgtgaaggacctgagtgaatcggtagatgagacgaggctgcgagaa
attttcggacgctacgggaacgttgtctctgcaaaagtgatgcgtcacgagaatggtcta
agtaagggattcgggtttgtgtgcttctctaaccgcgaagaatcgaaacaggcgaagaga
gatctcgacggatatcttgtcgacggaaagtcgttggttgtccgagtggcagagcggaaa
gaggatcgggtcaagaggttgcagaagttcttcactgaaccgtcaggccaagttccatac
ggttccgttccgaaccttcctgtaggttttcccgtccagtctcacaatcaaccgatgcct
gtttcgtacgcatatcttcagccgttccatgtcgggcgatcctctttctacatgggttct
caggcattcctcccgaactacgtcacctcatatattcctgcgggagaatcacagtccaag
aaaaaccagccacaggatgaggtgaacagaagaacggtgttcagcaaaagcaagggcaaa
acccgaaatgttggaagtcggaaacataggttcggtggcaaaggaaacggagttggagac
gcggaaatgccctcccgagcttcgaaatctactgtgagcctagacgaagcaacatcggtt
ctgaaagctgtactgctgaaatcctctcatgcttgtggcagtgaaagcagaaaattccaa
accaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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