KEGG   Tarenaya hassleriana (spider flower): 104827347
Entry
104827347         CDS       T04125                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
thj  Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:thj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:thj03041]
    104827347
   03009 Ribosome biogenesis [BR:thj03009]
    104827347
Enzymes [BR:thj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104827347
Spliceosome [BR:thj03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    104827347
Ribosome biogenesis [BR:thj03009]
 Eukaryotic type
  90S particles
   Helicases
    104827347
  Pre-60S particles
    104827347
SSDB
Motif
Pfam: DEAD Helicase_C Helicase_C_2 ResIII SNF2-rel_dom CMS1
Other DBs
NCBI-GeneID: 104827347
NCBI-ProteinID: XP_010558822
Position
Unknown
AA seq 675 aa
MLARAPPPSLTFPSRESLGNWRPILRLRRHGGAVVARAGYTRRPLESPGSYELVDHSTGD
RVIVVGDDDKEDDFSSPDDALSSIPSEIPRNGSRSRGVAASFGRLKAQKVKALVGRASRK
KQSVIHRDDEGEDTVSDNEEHFAEDSFGSSSILDYMRKKLVKGAITEQKEYVEPRKVERF
VRPWEDREPKELSTLDGSDEAFEEASDSRRRTDIKGDEVQTSSGKGSASNSRGWGDRRSV
ATSRERPIEEKRGSKFISTSETDFFSRKAFRELGCSDYMIKSLKEQNFIRASHIQALAFA
PVIEGKSCIVADQSGSGKTLAYLVPVIQRLREEEIQGQSKSSSRCPRVVVLVPTAELASQ
VLGNCRSLSRFGVPFRSMVVTGGFKQKTQLENLEQGVDVLIATPGRFMFLIKEGHLELTN
LRCVVLDEVDILFGDEDFEVTLQSLINSSPVTAQYLFVTATLPLAIYNKLVEVFPDCEAV
MGPRVHRVSPALEEVLVDCSGDDKAEKTPETAFVNKKAALLQIVEENPVPKTIIFCNKIE
TCRKVENILKRSDRKESQFRVLPFHAALAQESRLSNMKEFTSSQPEGSSLFMVCTDRASR
GIDFSGVDHVVLFDFPRDPSEYVRRVGRTARGAGGKGKAFIFAVGKQVPLARKIVERNLK
GHPLHDVPSAYEFTT
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgctggcgagagctccgccgccgtctctcacttttccgtcgagagaatccctcggaaat
tggagaccaatcttgcggctccgtcgccacggcggagcagtggtggcaagagcgggttac
actcggcggcctctggaaagtccgggctcgtatgagcttgttgaccattccaccggagat
agagtcatcgtcgtaggagacgacgacaaggaggatgatttctcttctcccgatgatgcg
ctctcttccattccgtcagaaattccgaggaatggttcgcgttcaagaggagtcgctgcg
agtttcggtagactaaaagctcagaaagtgaaagctcttgttggaagggcatcacggaag
aagcagtctgtgatacatagagacgacgagggcgaagataccgtctctgataacgaggag
cattttgcagaagatagttttggttcatcttccattctggattacatgaggaagaagttg
gtgaagggtgccattactgaacaaaaagaatatgtagagccaagaaaggttgaaagattc
gttagaccatgggaagatagggagccaaaagagttaagcacgttggatggatctgatgaa
gcttttgaagaggcttcggattctcggagacgtactgatatcaagggagatgaagtgcag
acttcgtccggtaaaggttctgctagtaactcgaggggttggggtgataggcgttctgtt
gcaacttcgagggagagaccgattgaagaaaagagaggcagcaaattcatcagtaccagt
gagactgactttttcagccgaaaagcatttcgggaactagggtgcagtgattatatgata
aaatccttaaaagagcagaattttattcgcgcttcacatattcaggctttggcctttgct
cctgttattgagggaaagagctgtattgtagctgatcaaagtggatcaggtaagacgctg
gcgtatctcgtaccggttattcagcgtcttagggaagaagagattcaaggacagagcaag
tcttcatcccggtgccctcgtgttgttgtattagtacccactgcagagttggcttctcag
gttcttggtaactgtcgttcactttcaaggtttggagtccctttccgttcgatggtcgtg
acgggtgggtttaaacaaaaaactcagcttgaaaatttggagcaaggtgttgatgttttg
atagctacaccagggcggttcatgttcctaattaaggaaggacacttagagttgacaaat
ttgagatgtgttgtcttggatgaggtggatatactctttggtgacgaggactttgaggtt
acgctgcaaagtctgatcaattcttcacctgttactgcacaatatctgtttgttacggct
accttacctctggcgatatacaacaaacttgttgaagtattccctgattgtgaagcagta
atgggacctcgtgttcaccgcgtaagccctgcccttgaagaggttcttgttgactgcagc
ggagatgataaggctgagaaaactccagagactgcatttgtcaacaagaaagctgctctt
cttcagattgtggaggaaaatcctgttcccaaaaccatcatcttctgcaataaaatcgag
acgtgtaggaaagtcgagaatatactaaagaggtccgacagaaaagaaagtcagttcagg
gtcctaccttttcacgcggctctggcgcaagaatcacggctttcgaacatgaaagagttc
acttcatctcagcctgaagggagctcgctcttcatggtttgcacggatagagcttcccgt
gggatagacttttccggggtggaccatgtcgtgctctttgactttccacgcgatccgagt
gagtatgtccgacgggtcggaaggacggcgagaggtgccggaggaaaggggaaggctttc
atcttcgcggtggggaagcaagtcccactggcacggaagatcgtggagcgtaacctgaag
ggccacccgcttcacgacgttccatctgcgtacgaattcacaacctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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