Entry |
|
Gene name |
mutM
|
Definition |
(GenBank) formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase
|
KO |
|
Organism |
thl Tetragenococcus halophilus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:thl00001]
Genetic Information Processing
Replication and repair
03410 Base excision repair
TEH_15040 (mutM)
Enzymes [BR:thl01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TEH_15040 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TEH_15040 (mutM)
DNA repair and recombination proteins [BR:thl03400]
Prokaryotic Type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TEH_15040 (mutM)
 |
SSDB |
    |
Motif |
 |
Other DBs |
NCBI-GeneID: NCBI-ProteinID: UniProt: |
Position |
complement(1518107..1518955)
 |
AA seq |
282 aa  
MPELPEVETVRKGLVTLVQDKTVAEVIVRWPKIIESPAVDTFCQKLIGQVINDIARRGKF
LIFEFTDFDLISHLRMEGKYEYTPKNTEAPVDKHTHVIFKFTDGSQLSYHDVRKFGRMAL
VEKGQYPFYKGIKQLGPEPVEEEFSLQAFEKKLQHSSSLIKPLLLNQKVVAGLGNIYADE
VLWLAKIHPQQPARTLTKKEAESLHQAIIAILAKAVRAGGTTIRSYKNALGEAGFFQVSL
NVYGKTGEPCPRCETPIKKIKVAQRGTHFCPHCQKLKRRKLS |
NT seq |
849 nt  +upstreamnt +downstreamnt
ttgccggaattgccagaagtagaaacagttagaaaagggctagttacccttgtccaagac
aaaactgttgcagaagttattgttagatggcctaaaatcattgaatcaccggcagttgat
acattttgccaaaaactaatcggacaagttatcaatgatattgcgcgtagagggaaattt
ttaatttttgaatttactgattttgatttgatttctcatttacgtatggaaggtaagtac
gaatatacaccaaagaatactgaagctccggttgataaacatactcatgtgatatttaaa
tttacagatgggagtcaactgtcctatcatgatgtaagaaaatttggacgcatggcttta
gtagaaaaaggacaatatccgttttataaagggattaagcaattgggaccagaaccagta
gaagaagaattttcattgcaagcatttgagaaaaaactacaacattcttcttctttaata
aaacctctgttacttaatcaaaaagttgtagcaggtctaggaaatatttatgcggatgaa
gtattatggctagctaaaattcatcctcaacagccagctcgcactttaacaaaaaaagaa
gcagaaagtttacaccaggcaattattgctattttagctaaagcagttagagcgggtggg
acaaccattcgttcttataaaaatgctttaggtgaggcaggattttttcaagtgagttta
aatgtttatggtaaaacaggtgaaccctgtcctagatgtgaaacgcctattaaaaaaatt
aaagtggcgcaaagaggcacacatttttgtccgcattgtcagaaattaaagaggaggaag
ctgtcatga |