KEGG   Thermococcus paralvinellae: TES1_0238
Entry
TES1_0238         CDS       T03005                                 
Name
(GenBank) Metallo-beta-lactamase superfamily protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ths  Thermococcus paralvinellae
Pathway
ths03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ths00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TES1_0238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ths03019]
    TES1_0238
Messenger RNA biogenesis [BR:ths03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     TES1_0238
SSDB
Motif
Pfam: RMMBL Lactamase_B Lactamase_B_2 NSUN5_N DUF3562
Other DBs
NCBI-ProteinID: AHF79635
UniProt: W0I5C0
Position
222011..223336
AA seq 441 aa
MINIYTLGGYEEVGKNMTAVEYNGEIVIIDMGIRLDRVLIHEDVNLQQMSSKELRKIGAI
PDDTPIRNKKVVAIAFSHGHLDHIGAVAKLAPHYPDVPIYGTPYTIKLAKSEVKSEQYFE
VKNPMYETQYGEIVQVSENLAIEFVQITHSIPQSSIVVVHTPEGAVVYACDYKFDNNSPL
GEKPDYKRLKEIGKEGVKVLIAESTRVAEETKTPSEAVAKMLLEDFFYYDGIEEKGLIAT
TFASHIARLQELIEIANNMGRQAILVGRSLAKYTGIAKQLGLIKMKGSRVLRSPNAVQKV
LKEVSQARENYLLIVTGHQGEPGAILTRMANGELYDIGKDDTVVFSAGVIPNPLNIAQRY
ALETKLKMKGVRMVKNLHVSGHASREDHRYLIKMLNPENIVPAHGEFRMLTHYAELAEEE
GYLIGRDVFVSRNGYKVEISR
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgataaatatttacactttaggcggttacgaggaagtgggtaaaaacatgacagctgtt
gaatacaacggggaaattgtgataatcgacatgggcattcgcttggatagggttctcatt
catgaggatgttaatttgcaacagatgtcctctaaagagttaagaaagataggtgcaatt
ccagatgacactccaattaggaataaaaaagttgttgcaattgccttttctcatggtcat
cttgatcatattggtgcagtggcaaagttagctcctcactatccagatgtcccgatttat
ggaaccccgtatacgataaagcttgcaaagagtgaagtcaagagcgaacagtattttgaa
gttaaaaacccaatgtatgagactcagtatggcgaaattgttcaagttagtgaaaatctg
gcaattgaatttgttcagataactcattcaattccccaatcttcgatagttgttgttcac
actccagaaggtgctgtggtttatgcatgcgattacaaatttgacaataatagccctttg
ggagaaaagcctgattacaagaggcttaaggaaattggtaaggaaggggtaaaagtttta
attgcggaatccacaagggttgccgaagaaacaaagactccaagtgaagcggttgcaaag
atgctccttgaggatttcttttattacgatggtatagaggagaaaggtttgatagccaca
acatttgcttctcatatagctcgtcttcaggagcttatagagatagctaacaatatggga
aggcaagctattttggttggtcgttccttggcaaaatacaccggtatagccaagcagctt
ggactgataaaaatgaaaggctcgagggttttaagaagccccaatgcagttcaaaaagtt
cttaaggaagtttctcaggcaagagagaattatcttttaattgtcactggacatcaagga
gaacctggtgccattcttacaagaatggctaatggggagctttatgatataggcaaagat
gatactgttgtcttttctgcaggagttattccaaaccctcttaacatagcccagagatat
gccttagaaaccaagttgaagatgaagggtgttagaatggtaaagaatcttcacgtttct
ggtcatgcctcaagggaggatcatcgttatctgattaagatgcttaatccagagaatatt
gtaccagctcacggagaatttagaatgttgactcattatgctgagcttgcggaggaggaa
ggatatttaattggtagagatgtgtttgtctcaagaaatggatataaggttgagatctcg
aggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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