KEGG   Thermoanaerobacter sp. X513: Thet_1965
Entry
Thet_1965         CDS       T01317                                 
Name
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
thx  Thermoanaerobacter sp. X513
Pathway
thx03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:thx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Thet_1965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thx03400]
    Thet_1965
Enzymes [BR:thx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Thet_1965
DNA repair and recombination proteins [BR:thx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Thet_1965
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme PI_PP_I
Other DBs
NCBI-ProteinID: ADN55530
Position
1938837..1939760
AA seq 307 aa
MSMIEEKISPMLASSSDPFDSPEWIYEIKWDGSRTIAFLSNKTRLQDRRLVDITHQFPDL
ALLYKQIKAKEAILDGELVVLKNGKPSYKSIMSRKHQQNLVKINLLSKIMPVIFITWDIL
YLNGKSLVELPLIERKDILRKTVKENEIIKISDFIFEHGKMLFEETGKRGLEGIVAKKAD
SKYLIGKRSKLWLKSKHFIVINAVIIGYRTDKTALILGLYDEENNLINIGSCESGLSQKE
LKAFYEVAKEIKAPDNYYNFKEKNVQWLKPLLTCKVRFMEWSENMKMRTPSFIQFEYNVK
PEECRFE
NT seq 924 nt   +upstreamnt  +downstreamnt
atgtctatgatagaagaaaaaatatcacctatgctggcatccagtagtgacccttttgat
agccccgaatggatatatgaaatcaaatgggatggttcaaggactattgcctttctttca
aataaaacaagacttcaagatagaaggcttgttgatataacccatcagtttccagatttg
gcattactttataagcaaataaaagcaaaagaagcaatacttgacggtgaacttgtagtt
ttaaaaaacggcaagcccagttacaaaagcattatgtcgagaaagcatcaacaaaattta
gtaaaaataaatcttttaagcaagataatgcccgtaattttcataacatgggatatatta
tacttaaacggcaaatctcttgtagaattgccacttatagagagaaaagatatacttaga
aaaacagttaaagaaaatgagatcataaaaatatcagattttatatttgaacatggaaaa
atgctttttgaagagacaggcaaaagaggacttgaaggaattgttgccaaaaaagcagat
tcaaaatatttaataggaaaaaggagtaaactctggcttaagtcaaaacattttattgta
ataaatgctgttattatagggtacagaactgacaaaacagccctcatactggggctttac
gatgaggaaaataatttaataaacataggaagttgtgaatcaggcctatcccagaaggaa
ttaaaagcattctatgaagttgccaaggagataaaagccccagataattattataacttt
aaagaaaaaaatgtgcagtggttaaaacccctactgacatgtaaagtgagatttatggaa
tggtctgaaaacatgaagatgaggacaccttcttttatccaatttgagtataatgtaaag
ccagaagagtgcaggtttgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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