KEGG   Thermotoga sp. Cell2: CELL2_05415
Entry
CELL2_05415       CDS       T03495                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
thz  Thermotoga sp. Cell2
Pathway
thz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:thz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CELL2_05415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thz03400]
    CELL2_05415
DNA repair and recombination proteins [BR:thz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CELL2_05415
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CELL2_05415
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR UB2H AAA_30 Kinesin AAA_22 SWI2_SNF2 AAA_25 Microtub_bd DUF87
Other DBs
NCBI-ProteinID: AIY88373
Position
1062545..1064539
AA seq 664 aa
MFKLVSEFEPTGDQPQAIEKLVEGLNRGMRFQTLLGVTGSGKTFTMANVIARVNRPALVI
SPNKTLAAQLYQEFKAFFPENRVEFFISYYDYYQPEAYIPTKDLYIEKNADINDVIVRMR
MSTLKSVRTRRDVVVVASVSCIYATGDPNDFDRMNINLAVGDRIDVLELAERLARIGYQR
TEDVSLSGCFRLKGDTVEIYPTYQDEGIRIEFFGDEVDSITLIDRFNRTTLEHLDKIIIY
PAVEFITTEEKLKRAVESIREELNERLSELKKQGKILEYERLKQRTLNDIELLETMGYCP
GIENYSRHFDGRKPGEPPYTLLDYFDKDFIVFIDESHITVPQLRAMYNGDRSRKKNLVEY
GFRLPSAYDNRPLTFEEFLKKTGQIIFVSATPGDFELSISEQVVEQIIRPTGLVDPEVEV
RPTAGQVDDLVNEIVKVKERGERALVTVLTKKTAELLSEHLTELGIRSLYLHSELDAIER
VEVLKKLRRGDVDVVVGVNLLREGLDLPEVSLVAIMDADVEGFLRSETTLIQIIGRTARN
INGKVIMYADRITNAMKRAIEETNRRRRIQLEYNKKHGITPRSVIKPLEIEVFEQFMVKE
EPERYGDTVKNIFEMKKTLSPEEYMAVLEEEMYRAASELRYEDAAALRDELFRIREEIKK
KKGL
NT seq 1995 nt   +upstreamnt  +downstreamnt
gtgttcaagctggtgagtgaatttgagccaacaggtgaccagccgcaggctatagagaaa
cttgtggaaggtttgaacagaggaatgagatttcaaacgctcctcggtgttacggggagc
ggaaagactttcaccatggccaacgtgatagcgcgcgtgaacagacccgcccttgtgatc
tcaccgaacaagacgctcgccgcccagctttatcaggagttcaaagcgttcttcccggaa
aatcgagtggagttcttcataagttactacgattactatcaaccggaggcctacattcca
acaaaagatctttacatagagaagaacgctgacatcaacgatgtgatcgtgcgaatgaga
atgtccacgttgaaatctgtgagaactcgtcgcgatgtggtggtagttgcgagtgtttcg
tgtatttacgccacgggagacccgaacgatttcgataggatgaacataaatctcgctgtt
ggagatagaatagacgttctggaactcgcggaaagactggcaaggataggctatcagaga
acggaggatgtgtctctttctggatgtttcaggctgaagggagacacggtggagatctac
ccgacgtatcaggatgaagggatcaggatcgaattcttcggagacgaagtggactcgata
acgttgatagacagattcaatcgcaccacactggagcaccttgacaagatcatcatctat
cccgccgttgaatttatcacaacggaggagaaactcaaaagagccgtcgaatcaataagg
gaggagcttaacgaaagactctcagagctcaaaaaacagggaaagatcctcgagtacgaa
cgcttgaagcagagaactctgaacgacatagagctgctggagaccatgggatactgtcct
ggaatagagaactactccaggcacttcgatggaagaaagccgggagagcctccgtacact
cttctcgattatttcgataaagatttcatcgttttcatagacgagtcacacatcacggtt
cctcaactcagggccatgtacaacggagacagatccagaaagaaaaatctggttgaatac
ggttttcgtctaccttccgcttacgacaacagaccgctgactttcgaagaatttttgaaa
aaaacaggccagatcatctttgtttccgctacgccgggagacttcgaactctcgatctct
gaacaggtcgtcgagcagatcattagacccacaggactcgtggatccagaggtggaggta
cgtcccaccgcggggcaagtggatgatcttgtgaacgagatcgtgaaagtgaaagaaaga
ggggaaagagcccttgttacggtgctcaccaaaaaaacggcagagcttttgagtgaacat
ctgacggaacttggaataagatcgctctatcttcactccgaactggacgccatagagagg
gttgaggttttgaagaaactgaggcggggagacgtggacgtggtcgttggtgtgaacctt
ctgagggagggtctcgatcttcccgaggtgtcactggtagcgatcatggacgcggacgtg
gaaggcttccttcgatctgaaacaacgctcatccagatcatagggagaaccgcaaggaac
atcaacgggaaggtcatcatgtacgccgacaggataacaaacgcgatgaagagagctatc
gaagaaacgaacagaagaaggagaattcagctcgagtacaataaaaaacacgggatcact
ccacgttctgtgataaagcctctggagatagaagtgttcgaacagttcatggtgaaagaa
gagcctgagaggtacggagacactgtgaaaaacatctttgagatgaagaaaacgctctct
ccggaggagtacatggccgttctcgaagaggaaatgtatcgggctgcgagtgagctcaga
tatgaagacgcagcggccttgagggatgagctgttcagaatcagggaagagataaaaaag
aaaaaggggctttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (21)   

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