KEGG   Thermodesulfatator indicus: Thein_0156
Entry
Thein_0156        CDS       T01546                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
tid  Thermodesulfatator indicus
Pathway
tid03030  DNA replication
tid03410  Base excision repair
tid03420  Nucleotide excision repair
tid03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Thein_0156
   03410 Base excision repair
    Thein_0156
   03420 Nucleotide excision repair
    Thein_0156
   03430 Mismatch repair
    Thein_0156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tid03032]
    Thein_0156
   03400 DNA repair and recombination proteins [BR:tid03400]
    Thein_0156
Enzymes [BR:tid01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Thein_0156
DNA replication proteins [BR:tid03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Thein_0156
DNA repair and recombination proteins [BR:tid03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Thein_0156
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Thein_0156
   MMR (mismatch excision repair)
    DNA ligase
     Thein_0156
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Thein_0156
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD HHH PTCB-BRCT HHH_3 HHH_8 UPF0758_N OrfB_Zn_ribbon BRCT_2 Zn_ribbon_recom zf-NADH-PPase RlmA_N
Other DBs
NCBI-ProteinID: AEH44041
UniProt: F8A8Z2
Position
complement(160039..162120)
AA seq 693 aa
MAESEKDAKQEKKPEIPPEIIERVKKLREEIEYHNYRYYVLDSPVISDAEYDALMRELKE
LEAKYPELVTPDSPTQRVGYPPAKEFRQVPHAEPMLSLDDAMTEEEVYEFDRRIKRLLNL
PEDAQIEYTVEPKLDGLAVELVYENGVFTVGSTRGDGYVGEDVTNNLKTIKSIPLRLRPL
TDDAPPVPKRLDARGEVFMEKEKFKQLNEERIKKGEPPFANPRNAAAGSLRQLDPNITAQ
RPLDIFFYGVGKVEGHKFKTQWEVLTTLPKWGLKTNPLCRLIKGIKEAIAYHHELEKKRD
ELPYEIDGVVIKVNDLSLWEKLGTKARSPRYALAYKFEPTQVTTQVLDIVVQVGRTGAVT
PVAILKPVKVGGVIVSRATLHNEDEVRRKDIRIGDWVLVQRAGDVIPEVVMPIKERRTGK
EKPFEMPKTCPVCGSKLVRKPGEAVWRCPNKNCYAQLVRHLQHFASRNAMDIEGLGEQVA
KALVDMGLVRDVGDLYYLSVEDFLQLPGFALKKAQNLYNAIQKSKKTTLPRFLYALGIRH
VGEVAAQTLAEHFKSLDKIMNASMAELMAIPGVGPEMARSIVEYFRNPHNREVIEKLLKA
GIEFEDLKEEKPEEKSLKGLTFVFTGALKTMTRDEAKKKVQALGGKVASDVSRNVDYVVV
GEKPGSKFTRAQRLGLKIIGEDEFLKMIGEKKE
NT seq 2082 nt   +upstreamnt  +downstreamnt
atggccgaaagcgaaaaggatgctaaacaggaaaaaaagcctgaaatccctcctgaaata
atagaaagggtaaaaaaactccgcgaggaaatagaatatcacaactaccgctactatgtg
cttgattctccggttatttctgacgctgaatacgacgccttaatgcgagaactaaaagag
cttgaggcgaagtatcctgaacttgtaacaccagattctcccacccaaagagtcggctac
ccgccggccaaagaattcaggcaggtgcctcacgctgagcccatgctttctcttgacgac
gccatgactgaagaagaagtctatgagtttgacaggcgtataaaaaggcttcttaacctg
cctgaagacgcccaaatagaatataccgttgaacccaaacttgatggtctggccgtagaa
ctggtttatgaaaacggtgtttttaccgtgggctctacccgcggcgatggttatgtgggc
gaggatgtaactaataatttaaagactattaagtccattcctttgcgcttgaggccgctt
accgatgatgctccgccggtgcccaaacgccttgacgcccgcggtgaagttttcatggag
aaagaaaaattcaaacagcttaacgaagagcgtataaaaaaaggcgagccgccttttgcc
aatcccagaaacgcggcggctggttctttgcgccagcttgatcccaatattaccgcccaa
aggccccttgatatctttttctacggggtaggaaaagttgaaggtcataaatttaaaact
cagtgggaagtgcttaccacccttcctaagtggggccttaagaccaacccgttgtgccgt
ctgataaagggtataaaggaagctattgcttaccaccatgagctcgaaaaaaagcgcgac
gaattgccttacgaaatagacggcgtagtcattaaagttaatgacctctctctctgggaa
aagcttggcaccaaggcgagaagtccgcgctatgctttggcttacaagtttgaacccacc
caggttaccactcaggtgcttgacatcgttgttcaggtgggccgcactggagctgttacc
ccggtggccatacttaagccggtaaaagtaggtggcgtaattgtttcccgcgctaccctt
cataacgaagatgaagttcggcgcaaagatatccgtatcggcgattgggttctggtgcaa
agggcaggggatgtcattcctgaggtggtaatgcccataaaagaacgccgcaccgggaag
gaaaagccctttgaaatgccaaagacctgcccggtttgcggtagcaaacttgtgcgcaaa
ccaggagaagccgtctggcgctgccctaacaaaaattgttatgcccagcttgtaaggcat
cttcaacattttgccagccgcaacgccatggatatagaaggcctgggagaacaggtagcc
aaggccctggtagacatgggcctggtaagagatgttggcgatctttattatctctctgta
gaagattttctccagctacccggctttgctttaaagaaggcccaaaatctttataacgcc
atccaaaaaagcaaaaagaccacacttccgcgctttctttacgcgcttggtattcgccat
gtgggtgaagtagctgcccaaactttagccgaacactttaaaagccttgataaaattatg
aacgcctctatggcggagcttatggctattccaggcgtagggcctgagatggctagaagt
attgttgaatatttccgcaatcctcacaatcgggaggtcattgaaaagctccttaaagct
gggattgaatttgaagacttaaaagaagaaaaacctgaagaaaagtcccttaaagggctc
actttcgtctttaccggggccttaaagaccatgacccgcgatgaggccaaaaagaaagtc
caggccctgggaggcaaagtagcctctgatgtttctcgaaatgttgactatgtagtggtg
ggcgaaaagcctggttctaaatttacccgcgcccagcgcttggggctaaaaattataggc
gaagacgaatttttaaagatgatcggcgagaaaaaagaataa

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