KEGG   Thiomonas intermedia: Tint_0343Help
Entry
Tint_0343         CDS       T01227                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tin  Thiomonas intermedia
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:tin00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Tint_0343
Enzymes [BR:tin01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Tint_0343
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Tint_0343
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(368715..369590)
Genome map
AA seq 291 aa AA seqDB search
MPELPEVEVTRQGLEPALLGARLTGLRLGKPLRWPLNIDPQTLVGLRIKALERRGKYLLL
RLSQTAASPNTAGVLIVHLGMSGSLRWTPAAQVPAPLSPHEHVEWLTDRGVLRLRDPRRF
GAVLWHAGEEVQRHPLLRVLGPEPLGADFKGATLCRALAGRKAAIKPLLLSQHIVAGIGN
IYACEALFRARIDPRTPASHLRPVHCDRLAAAVRETLQQAVALGGSSLRDFAHSDGELGY
FQMQALVYGRVGQPCRVCATPIRQIVQGQRSTYFCPKCQKILKAKPKAGIR
NT seq 876 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgcccgaagtcgaagtcacccgccagggtctggaacccgccttgctcggc
gcccgcctgaccggcctgcgcctgggcaaaccgctgcgctggccgttgaacatcgacccg
caaacgctggtcgggctgcgcatcaaagcgcttgagcggcgcggcaaatatctgctgctg
cgactgtcgcagaccgccgcctcgccgaacaccgcaggcgtgctgatcgtgcatctgggc
atgtcgggttctttgcgctggacaccggccgcgcaagtgcccgccccgctgtcgccgcac
gagcatgtggaatggctgaccgaccgcggggtgctgcgcctgcgcgatccgcgccgcttc
ggtgcggtgctctggcacgcgggtgaggaagtgcagcgccatcctctgctgcgcgtgctc
ggacccgagccgctgggcgccgacttcaaaggtgccacgctctgccgcgcgctggccgga
cgcaaggcggcgatcaagccactgctgctgtcgcagcacatcgtcgccggaattggcaat
atctacgcctgcgaggccctgtttcgtgcgcggatcgacccgcgcacaccggcttcgcat
ctgcgccccgtccattgcgatcgcctggccgcggcggtgcgcgaaaccttgcaacaagcg
gtggcgctgggcggcagcagcctgcgcgactttgcccacagcgatggcgaactggggtac
tttcaaatgcaggcgctggtttacggccgagtcggccagccttgtcgcgtctgcgccacg
cccatccggcagatcgtgcaggggcagcgcagtacctatttctgccccaagtgccaaaaa
attctcaaagccaagcccaaggcggggatacgctga

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