KEGG   Thioalkalivibrio sp. K90mix: TK90_0396
Entry
TK90_0396         CDS       T01174                                 
Name
(GenBank) NUDIX hydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
tkm  Thioalkalivibrio sp. K90mix
Pathway
tkm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tkm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TK90_0396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tkm03019]
    TK90_0396
Messenger RNA biogenesis [BR:tkm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     TK90_0396
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: ADC70911
UniProt: D3SDU1
Position
413322..413888
AA seq 188 aa
MQVIDCEGYRANVGIILCNRERQLFWGKRVGQDAWQFPQGGIRAEETPEQAMYRELREET
GLLPEHVEVLGNTQHWLRYRLPERMVRRHRRPVCIGQKQRWFLLRMMGNETDVILDAMGT
PEFDDWRWIDYWRPAREVVHFKRQVYRRALCELVPLMFPELEARRPRNAHGRDASDQAPS
QVSPVSPR
NT seq 567 nt   +upstreamnt  +downstreamnt
atgcaagtgattgattgtgaggggtatagagccaacgtaggcatcatcctgtgcaatcgg
gagcgccagctgttctggggcaaacgcgtgggccaggatgcctggcagtttccccagggc
ggtatccgcgcggaagagacgccggagcaggcgatgtaccgtgagctgcgcgaggagacg
ggcctgctgcccgagcatgtcgaggtgctcggcaatacccagcactggctgcgctaccgc
ctgccggagcgcatggtgcggcgacaccgtcgcccagtctgcatcggccagaaacagcgc
tggttcctgttacggatgatgggcaacgagaccgacgtgatcctggatgcgatgggtacc
cccgaattcgacgactggcgctggatcgactactggcgtccggcacgcgaggtcgtgcat
ttcaagcgtcaggtctatcgccgtgcgctgtgcgagctggtgccgctgatgttcccggaa
ctggaagcccggcgcccgcgcaatgcccacggacgcgatgccagtgatcaggccccgtca
caggtctccccggtgtctccacgttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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