KEGG T.maritima: TM0024

Thermotoga maritima: TM0024

Entry

TM0024 CDS T.maritima

Definition laminarinase

Class

SSDB

Motif Pfam: CBM_4_9 Glyco_hydro_16 SKN1 Endotoxin_C TRF2

Other DBs NCBI-GI: 15642799
NCBI-GeneID: 896840
JCVI-CMR: TM0024
UniProt: Q9WXN1

Structure

PDB: 1GUI

Position complement(21459..23387)

AA seq 642 aa
MMSRLVFALLLFPVFILAQNILGNASFDEPILIAGVDIDPPAEDGSIDTGGNWVFFTNSN
GEGTARVENGVLVVEITNGGDHTWSVQIIQAPIRVEKLHKYRVSFRAKASSQKNIGVKIG
GTAGRGWTAYNPGTDESGGMVFELGTDWQKYEFEFVMRQETDENARFEFQLGRYTGTVWI
DDVVMEDIGVLEVSGEENEIYTEEDEDKVEDWQLVWSQEFDDGVIDPNIWNFEIGNGHAK
GIPGWGNGELEYYTDENAFVENGCLVIEARKEQVSDEYGTYDYTSARMTTEGKFEIKYGK
IEIRAKLPKGKGIWPALWMLGNNIGEVGWPTCGEIDIMEMLGHDTRTVYGTAHGPGYSGG
ASIGVAYHLPEGVPDFSEDFHIFSIEWDEDEVEWYVDGQLYHVLSKDELAELGLEWVFDH
PFFLILNVAVGGYWPGYPDETTQFPQRMYIDYIRVYKDMNPETITGEVDDCEYEQAQQQA
GPEVTYEQINNGTFDEPIVNDQANNPDEWFIWQAGDYGISGARVSDYGVRDGYAYITIAD
PGTDTWHIQFNQWIGLYRGKTYTISFKAKADTPRPINVKILQNHDPWTNYFAQTVNLTAD
WQTFTFTYTHPDDADEVVQISFELGEGTATTIYFDDVTVSPQ

NT seq 1929 nt +upstreamnt +downstreamnt
atgatgagcaggctggttttcgctctgcttctctttcctgttttcattctggctcaaaac
atccttggcaacgcttctttcgatgaaccaattctcatcgcaggtgtggatatagaccca
cccgcagaggatggctctatagacacaggaggaaactgggtattcttcaccaattcaaac
ggtgagggaacggctcgagtcgaaaacggcgttctcgtggttgagataacaaacggagga
gatcacacctggtcggttcagatcatacaggctcccatacgtgttgagaaactccacaag
tacagagtttctttccgagccaaggcttcctctcaaaagaacatcggggtgaagatagga
ggaacggccggaagaggatggaccgcgtacaaccccggtaccgacgaatccggcggcatg
gtcttcgagctcggaacagattggcagaagtacgagttcgaattcgtcatgagacaggag
accgatgaaaatgctcgtttcgagtttcagcttggaaggtataccggcacggtctggata
gacgacgtagtgatggaggacatcggtgttctcgaggtaagcggtgaggaaaacgaaatc
tacaccgaggaggatgaagacaaagtggaagactggcagctcgtttggagtcaggagttc
gatgacggtgttatcgatccgaacatctggaacttcgagataggaaacggtcatgcaaaa
ggtattccaggctggggtaacggggaactcgagtactatacagacgaaaacgcgttcgtt
gagaacggctgtcttgtgattgaggcaagaaaagaacaggtttccgatgagtacggaacc
tacgactacacctcagccaggatgaccacagaaggaaaattcgaaataaagtacggaaaa
atcgaaataagggcaaaacttccaaaaggaaaaggtatctggcccgctctctggatgctc
ggaaacaacataggagaggtcggatggcccacctgtggtgagatagacatcatggaaatg
cttggccacgacaccagaaccgtttatggaacagcacacggtccgggatattctggtggt
gcgagtataggtgttgcctatcatcttccagaaggagttcctgatttctccgaagacttc
cacattttctccatcgagtgggacgaagacgaagtggagtggtacgtggacggacagctc
taccacgtcctcagcaaggatgaactggccgaactcggtcttgagtgggttttcgaccat
ccgttcttcctcattctgaacgttgccgtgggaggctactggccgggttatcccgacgaa
accacccaattcccgcagagaatgtacatcgactacatcagagtctataaagatatgaat
ccggaaacaatcaccggggaagtggatgactgcgaatatgaacaagcacagcagcaggca
ggtcccgaggtgacctatgaacagataaataacggcactttcgacgaacctattgtgaac
gatcaggccaacaacccggacgaatggttcatttggcaggcgggagattacgggatcagc
ggtgccagggtctccgattacggtgtcagggatggctacgcttatatcacgatagccgat
cctggaactgacacgtggcatattcagttcaaccagtggataggtctttacagaggaaaa
acctacaccatttctttcaaagcaaaagcggatacaccaagacctataaatgtgaaaatt
ctgcagaatcacgatccctggaccaactattttgctcaaacggtgaatctcacagcggac
tggcagacgttcacgttcacctacacgcatccagacgatgcggatgaggtcgttcagatc
agtttcgaactcggagaaggaacggcaactacgatttatttcgatgatgtcacggtgagc
cctcaatga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)

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