KEGG T.maritima: TM0461

Thermotoga maritima: TM0461

Entry

TM0461 CDS T.maritima

Definition DNA polymerase III, alpha subunit, putative

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway tma00230 Purine metabolism
tma00240 Pyrimidine metabolism
tma01100 Metabolic pathways
tma03030 DNA replication
tma03430 Mismatch repair
tma03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:tma00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:tma00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:tma03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:tma03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:tma03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP

Other DBs NCBI-GI: 15643227
NCBI-GeneID: 897492
JCVI-CMR: TM0461
UniProt: Q9ZHG4

Position complement(489233..491761)

AA seq 842 aa
MIPWVISPYSFDGSVVRFEKLALLLKRKGLKSVILADRNFHAAVKFNTIMRKHGLIPVHG
LWKDGRIFVARNREEFDSLVRYYNGETHEIEDIPVFQESELTPVRYLDASEKKASIFMRK
IFGLDEDVQGFPEKCEDVADILNAEAYDLRVNHRFPTPPKNWNELLIKKAEPLGEEYISR
LKRELEVIKRKGFTPYIYTVEKVVEIAKKMGIKVGPGRGSAVGSLVAYLCGITEVDPIKY
DLLFERFLNEERQEPPDIDVDVEDRRRKDLIKELSKSFQVYQVSTFGNLTEKSLKNLINS
VLPDASLEEKNEIYKTVYGLPHHPSVHAAGVVISENPLPLPTRTEEDIPITDYDMYDLQE
IGVVKIDILGLKTLSFIKDFKKEIFDYSDEKTYHLISKGKTLGVFQLEGLQARKLCRRIS
PRNMDELSILLALNRPGPLRSGLDVMFSNSKNVPAFFRKMFPETRGVLIYQEQIMRLAMF
AGLSGTEADILRRAIAKKEREKMEPLLEKMKKGLLEKGMENAEQILEILLNFSSYAFNKS
HSVAYAHITYQTAYLKAHHLEEFFKLYFAYNSSDAGKIFLAVQELRNEGYRVHPPDINIS
GKDLVFHGKDVYLPLTVVKGVGVTLVEQIEKIRPVSSVRELQERVTGVPRNVVESLITAG
AFDKLYENRKLALEELNKRVEKDILEIRSLFGEKVEQESSNIKIGDITELEEKSMGFPLT
PVHEVPTGLFARIDDVFTYGRILPVLVKRVSRNIVTDGLSVCRVRTDVPDGVHLVLLSPL
QKIIKIWPFNENTRFVYRVDFTATLEKAGQNEITEVLKNGAVVRYEGYRPLTDEYRYRVV
PR

NT seq 2529 nt +upstreamnt +downstreamnt
atgattccatgggtgatatctccctattctttcgatggctcagtcgttcgattcgaaaaa
ctggcccttctcttgaaaagaaagggactgaaatcagtcatcctcgccgacagaaacttc
cacgccgccgtgaagttcaacacgatcatgaggaaacacggcctgataccggttcacggt
ctctggaaagacggcagaatcttcgtcgcgagaaacagagaggaattcgacagcctggtc
aggtactacaacggagaaacacatgaaatcgaagacatacctgttttccaagaaagcgaa
ctaacacctgtgagatatctcgatgcctctgaaaaaaaggccagcatcttcatgagaaag
atcttcggactcgacgaagacgttcagggttttccagaaaaatgtgaagatgtggccgac
attctgaacgcagaagcctacgatctcagagtgaatcacagatttcccactcctcctaaa
aattggaacgaattactaataaaaaaggcagaaccattgggtgaagagtacattagccgt
ctgaaaagagaactcgaggtgataaaaagaaagggtttcaccccgtacatctacacggtg
gaaaaagtggtagagatcgcaaagaaaatgggcataaaagtcggtcctggaagaggaagt
gcggttggttctctcgttgcatacctgtgcggaataacagaggtagatccaataaaatac
gaccttctcttcgaacgcttcttgaacgaagaaaggcaggaaccacccgatatagatgtg
gatgtggaagacaggagaagaaaagacctgataaaggaattatcaaagtcttttcaagtc
tatcaagtttcaaccttcggaaacctcacagagaaatctctgaaaaacctcataaactcc
gttcttccagatgcgtctcttgaagagaaaaacgaaatctacaaaaccgtttacggactg
ccgcaccaccccagtgttcacgccgcgggagtcgtgatctcagaaaaccctctgccacta
cctacaagaacagaagaagatatcccgataacggactacgacatgtacgatcttcaagaa
ataggtgttgtgaagatcgatatactgggtcttaaaacactctcgttcataaaggatttc
aaaaaagaaattttcgattactcggatgaaaaaacgtatcatctcatctccaagggaaaa
actctcggtgtgtttcagctcgaaggtctccaggcaagaaaactatgcagaagaatctct
cccagaaacatggacgaactctccattctccttgccctcaacagacctggtccattgagg
tctggcttggacgttatgttttcgaattcgaagaacgttcccgcgtttttcaggaagatg
tttccagagacaagaggggttctgatctatcaggaacagatcatgcgactcgccatgttc
gcgggcctctcaggcaccgaagcggatattttgagaagggccattgcaaagaaagaaaga
gaaaaaatggaacctctccttgaaaagatgaaaaaaggccttcttgaaaaaggcatggaa
aacgcagaacagattctcgagatcctcctgaacttttcctcttatgccttcaacaaatcc
cacagcgtcgcgtacgcccacatcacataccagacggcatatttgaaagcccatcatctt
gaagaatttttcaaactctactttgcgtacaattcttccgacgctggaaagatcttcctt
gccgttcaggaactgagaaatgaaggatacagggtgcatcctccagatatcaacatctct
gggaaagatctggtctttcacggtaaagacgtttaccttcccctgacggttgtgaaagga
gtgggcgtgaccctggttgaacagatcgaaaaaatcaggccggtcagcagtgtgagggaa
cttcaggagagggtaaccggagttccgagaaacgttgtggaaagcttgatcacagcaggc
gccttcgacaaactttatgaaaacagaaaactagcactagaggaactgaacaaaagggtg
gaaaaagatattctggagattcgaagcctcttcggagaaaaggtagagcaggaaagttca
aacatcaaaataggagacatcaccgagctcgaggaaaagagcatgggattcccgttgaca
cccgttcatgaagttcccacaggactctttgcccgtatagacgatgtcttcacgtatggt
aggatccttcctgtgcttgtcaaaagagtttcgagaaacatcgtgacggatggtctttcc
gtttgccgtgtgagaacagacgttcccgatggtgttcaccttgtactcctttctcccctc
cagaagatcataaaaatctggcccttcaacgaaaacaccaggttcgtgtacagagtggat
tttaccgcgacactggaaaaggctggtcaaaacgagataacggaagtccttaaaaacggg
gctgtcgtaaggtatgaaggatacagacctctaacggatgaatatcgctacagagtcgtt
ccccgatag

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)

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