KEGG   Thioflavicoccus mobilis: Thimo_3629Help
Entry
Thimo_3629        CDS       T02397                                 

Definition
formamidopyrimidine-DNA glycosylase Fpg
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tmb  Thioflavicoccus mobilis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:tmb00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Thimo_3629
Enzymes [BR:tmb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Thimo_3629
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Thimo_3629
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(3972492..3973307)
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETTLRGLRPYLSGARVERLLVRERRLRYPIPVATETAVAGQRILHLRRRAKYL
IFELEQGALLVHLGMSGSLRMVPAGAPPGLHDHLDLCLAGGLALRLRDPRRFGALLWTAA
PPEVHPLLRHLGPEPLDPGFDGAYLHRLAQGRRLAVKPFVMDARHVVGVGNIYANESLHL
AGIHPKRASGRIGLGRYQRLAEAIRAVLTEAIAQGGTSLRDFVQEDGRPGYFRVSLRVYG
RGGEPCPGCGTVLRDERIGQRTSVYCPRCQR
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagctccccgaggtcgagacgacgctgcgcggcctgcgtccctatctcagcggg
gcgcgggtcgagcggctgctggtgcgcgagcggcgcctgcgctatccgatccccgtcgcg
accgagacggccgtcgccgggcagcgcatcctgcacctgcgccggcgcgccaagtacctg
atcttcgagctggagcagggcgccctgctggtacacctggggatgtcgggcagcctgcgc
atggtcccggcgggggcgccgcccggcctgcacgaccacctcgacctgtgcctcgcgggc
ggcctcgcgctgcggctgcgggatccgcgtcgcttcggtgcgctgctgtggaccgccgcg
ccacccgaggtccatccgttgctccgccacctgggcccggaacccctcgacccgggtttc
gacggcgcctacctgcatcggttggcccaaggccggcgcctcgccgtcaagcccttcgtc
atggacgcgcgccatgtcgtcggggtcggcaacatctatgcgaacgaatcgctccacctg
gcggggatccacccgaaacgcgccagcgggcggatcgggctgggacgctatcagcggctg
gccgaggcgatccgcgcggtcctgaccgaggcgatcgcccagggtgggaccagcttgcgc
gacttcgtccaggaggatggccggccgggctacttccgggtctcgttgcgggtctacggt
cgcggcggggagccctgtccgggctgcgggacggtgctgcgggacgagcgaatcggccag
cgcaccagcgtctactgcccgcgttgccagcggtga

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