KEGG   Thermosipho melanesiensis: Tmel_0981
Entry
Tmel_0981         CDS       T00550                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
tme  Thermosipho melanesiensis
Pathway
tme03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tmel_0981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tme03021]
    Tmel_0981
   03400 DNA repair and recombination proteins [BR:tme03400]
    Tmel_0981
Enzymes [BR:tme01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Tmel_0981
Transcription machinery [BR:tme03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Tmel_0981
DNA repair and recombination proteins [BR:tme03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Tmel_0981
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 PI3K_P85_iSH2 HHH_5 Seadorna_VP6
Other DBs
NCBI-ProteinID: ABR30842
UniProt: A6LLP1
Position
1001973..1002959
AA seq 328 aa
MDFIMPKNLKMEDHSETDEHYYARFVLSPLEKGYATTIGNTLRRVLLSSIPSLAITDVKF
VRPEKYHEFDTIEGVKEDIIEILLNLKKVQLKMESYVNTPVELTIQHKGEGEIKAGDIVV
PAGVTVTNPNLHIATLNEDADIEIKMYATVGKGFVPAAERNERPDIGWIVLDGVYNPILK
VNWKIENVRVGKKTDYDKLILEVWTKKNIKPVEALKQAVKIINDHFKLIEESFGDMEDAG
IVIETTKAEIVEEKIDENEILNKKIDELDLSMRALNCLKRDKIETIGDLLERGEEELLKI
KNFGQKSLDEVKEKLMEKFGISFGKEEE
NT seq 987 nt   +upstreamnt  +downstreamnt
atggattttattatgcccaaaaatcttaagatggaagatcattctgaaacagatgagcat
tattatgcgcgattcgtattgtctccattggaaaaagggtatgcaacaacgattggtaat
acattgaggagggttttactttcttccattccttcacttgcaattactgatgtaaaattt
gtaaggccagagaagtatcacgaatttgatactattgaaggtgtaaaagaagatataata
gaaattttgttaaatttaaaaaaagttcagctaaagatggaaagttatgtgaatacacct
gtagaactgacaattcagcataaaggtgaaggagaaattaaagcaggggatatagttgtt
ccggcaggtgtgactgtaacaaatccgaatttacatatagcaactttgaatgaagatgca
gatatagagataaagatgtatgcaaccgttggaaaaggttttgttccagcagctgaaaga
aacgaaagacctgatattggttggattgtattagatggggtatacaatcccatattgaag
gttaattggaagatagagaatgttagggttggtaaaaaaacagactatgataaattgatt
ttggaagtttggactaagaagaatataaaacctgttgaagctttaaagcaagcagttaag
ataattaatgatcactttaaactaattgaagagagttttggagatatggaagatgcaggt
atagttattgaaacaacaaaagcggaaattgttgaggaaaaaatagatgaaaacgagatt
ttgaataagaagatagacgagttggatttatccatgagggcattgaattgtttaaaaaga
gataaaattgaaacgataggtgacttgttagaaagaggagaggaagagttattaaaaata
aagaactttggtcaaaagtcattagatgaagtcaaagaaaagttgatggagaagttcgga
attagttttggaaaggaggaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system