KEGG   Tuber melanosporum: GSTUM_00002678001
Entry
GSTUM_00002678001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
tml  Tuber melanosporum
Pathway
tml03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GSTUM_00002678001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tml03021]
    GSTUM_00002678001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     GSTUM_00002678001
 Prokaryotic type
  Archaeal type
    TFE
     GSTUM_00002678001
SSDB
Motif
Pfam: TFIIE_alpha TF_Zn_Ribbon zf-C2H2_6 zinc_ribbon_4 zf-H2C2_2
Other DBs
NCBI-GeneID: 9181425
NCBI-ProteinID: XP_002836415
INRA: GSTUM_00002678001
UniProt: D5G7W3
AA seq 454 aa
MEIAKSLVKCVARAFYDTKHILVLDALMIHNAVRDDELGKLLGFQSKDLQKLCGRLKEDR
MLAVHNRPEQKEGQQRPTNRTYYYVEFRSTIDAVKYRMHGVVKDVEKKMNKDADTKGYVC
PYCQKRFSILDAMSVARDEMGLFVCDRCNTTLVDDDDSAEVKTSQERLGRLMEQMKKIID
MLKMIDEIVVPVNDFETAIANSVPVPRDKNHLYSVPVAGKGATSTRSSGAPASIEVSFTS
TSEKTAAELASEQAMKQAQAEKNALPVWHTKSTVDPGATTTAGAKEAAEREARALDGIGI
AQKSKEEEGKKAAASNGANGIQADAIAEYYAALAAQKAKEAQEEQEDDDDDEEEEDGEEG
ARGIGGGRHEEEEEDEGEDDDEDDDDEGNFEDVVNSNAFTPPTATNSIKVKDDDSDDDST
APAAKKPRLTETEDKEEGGEEDSDEEADFEDLKL
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaaatcgcaaagtccctcgtaaagtgtgtagctcgtgccttttacgatacaaagcat
attcttgtcctcgatgccctcatgatccataacgctgttcgcgatgatgagctggggaaa
ttgttgggctttcaatctaaggacttacaaaaattatgcgggaggctgaaggaagatcgc
atgctcgctgtgcataatcggccagaacagaaggaagggcaacagcgaccgacaaaccgg
acttactactacgttgagttcaggagcacaatcgacgctgtcaagtatcgcatgcacggc
gttgtcaaggacgtggagaagaagatgaataaggacgctgacacaaaaggatatgtatgt
ccatactgccagaagaggttctcaatcctggatgcgatgtcggtggctcgcgatgagatg
gggctgtttgtttgcgatcggtgtaatactacacttgtggatgacgatgatagcgccgag
gtcaaaacaagtcaggagcggttggggagactaatggagcagatgaagaagattattgat
atgctaaagatgattgacgagatcgttgtgccggttaatgatttcgagaccgccattgcg
aattctgttcctgtgcctcgagataagaatcacctctactcagtccccgtcgctgggaaa
ggcgccacgagcacccgaagctccggagcccctgcttccatcgaagtttctttcacttcc
acctcggagaagacagctgctgagcttgcctcagagcaggcgatgaagcaagcccaggct
gagaagaacgcacttccggtctggcacaccaagtctaccgttgaccccggcgctacgacc
accgctggggccaaggaggctgcggaaagggaagctcgtgccctcgatggtattggaatt
gcgcaaaagtccaaggaggaggaaggcaagaaagctgctgccagtaacggggcgaatggc
attcaggcagacgctatcgctgaatattatgccgcattggcagcccagaaggccaaggaa
gcccaggaggagcaagaagatgatgatgacgacgaagaggaagaagacggtgaggagggg
gcgcgggggattgggggtgggcggcacgaggaggaagaagaagacgagggtgaggacgac
gatgaggacgacgatgacgaaggaaactttgaagacgttgtcaatagcaacgctttcact
cctcctactgctacgaattcaattaaggttaaggatgatgactcagatgatgactccacg
gcccccgctgctaaaaaaccaaggcttactgagactgaggacaaagaagaaggcggagaa
gaggactccgatgaggaggctgactttgaggacctgaaattgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   INRA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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