KEGG   Tuber melanosporum: GSTUM_00005897001
Entry
GSTUM_00005897001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
tml  Tuber melanosporum
Pathway
tml03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GSTUM_00005897001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tml03009]
    GSTUM_00005897001
Enzymes [BR:tml01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     GSTUM_00005897001
Ribosome biogenesis [BR:tml03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    GSTUM_00005897001
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 9186403
NCBI-ProteinID: XP_002838030
INRA: GSTUM_00005897001
UniProt: D5GCH8
AA seq 250 aa
MASPSSPVKKRPRTQSLPPLPSLTAEQAVPISAEDRDSKRLIVVLARACLETHKVSANGG
EKYVLLNSDDHIGVLKKMGRDISDARPDILHQCLLTLLDSPVNKAGKLQVYIQSTKGVLI
EVNPTVRIPRTFKRFAGLMVQLLHKLSIRSTSSSEKLLKVIKNPVSQYLPPNCRKVTLSW
EAPVMNVREYISGLEDDESICVVVGAMAKGKDDFADGWVDEKIGVSNYSLSASVACSKFC
HAAEDVWGIL
NT seq 753 nt   +upstreamnt  +downstreamnt
atggcatcaccgagctctccggtcaagaagcggccgaggactcaatccctcccaccgcta
ccaagcctcacagcggagcaagcggttcccatctcggctgaagatagagattccaaacgg
ctaattgtcgtcctggcacgggcatgcctcgaaacccacaaagtttcggccaacggagga
gagaagtacgtcctcctcaactcagacgatcacattggagttttgaaaaagatgggtcgg
gatatcagtgacgctcggccagatatcctccatcagtgccttctcacactactagacagc
cccgtgaacaaagctggaaagctccaggtctacatccaatccaccaagggcgtcctcatc
gaggtgaaccctacggtgcgaataccccggacattcaagcgcttcgctggtcttatggtg
cagctgctacacaaactatccatccggtcgacctcctccagcgagaaactactcaaggtt
attaagaatcccgtttctcagtacctcccgccgaattgccgcaaggtgacgctgtcttgg
gaagcgcccgttatgaatgtccgggagtatatttccgggcttgaggacgatgagagcatc
tgtgttgttgtgggcgccatggcgaaggggaaggacgactttgccgatgggtgggttgat
gagaagattggtgtgagcaattactcgttgtcggcgagtgtcgcttgcagtaagttttgt
catgctgccgaggatgtttgggggatattgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   INRA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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