KEGG T01282: GSTUM

Tuber melanosporum: GSTUM_00007799001

Entry

GSTUM_00007799001 CDS T01282

Definition

hypothetical protein

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

tml Tuber melanosporum

Pathway

tml03030	DNA replication
tml03410	Base excision repair
tml03420	Nucleotide excision repair
tml03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:tml03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:tml03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tml03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:tml03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

INRA:

UniProt:

AA seq 852 aa
MASPSKKRKNFSNTQPTRTLHHFFNKQTATKKEALDSVLTPDPQLGPVALTDEQYAKRLA
EEWKQEDKAIRNATPSTHRESSRAGAKRGRSSSPSTKCAASSPHAHSGEEGWKDNLAAAT
LRASRAVTPVQKPNTPRILQEPKRIAASAEGALEIERAIDSMPLGEDPLNPEMARRECHL
CAPYSRIRPGKFNKVKDKDKDTLVNFLRILIRLDPDSLLPAVWLTTNDIGPSYETNEFGI
DGSIISKAIMKASGITPATLKKLNNKHGDPGDVAFEAKVKQRTLMMKKPTPLTIENVYAT
LVKISRASGKGSQEIKQRHIERLLVDAKGEEIRYLTRTLIRHLRIGAVKTTMLIALSRAF
SLSAPKGANWNTPEIPGSKEGRQELFTKAEEFLKQCHARRPNYNDIVPGLLRGGISSLEE
NCGTSIHSPLKPMLGSITRDLGEMLLKLKGCEFTCEYKYDGQRAQIHCDDNGKVSVFSRH
LELMTGKYPDLVQLVPNIRGEGVESFIMEGEVVAMDTETGLVKNFQTLAGRERKNVDVGR
ISVDVCLFAFDLMYLNGQELLSRPFRERRELLQSIRGYHPGLLPFIVRPKIFTPPASGPP
EGAQELESKQIRSRKGKEAAPVKRSSRVKPLLATYEPDKRLESWPKVKKDYTAATDTLDL
VPIAAWYGNGRKAAWWSPILLALHDPETGSFEAVCKCMSGFTDKYYIEMKDTLAPDGINT
SMTKRAYYEVADSLTPAIWFEPREVWEVAFADITVSPTYTAAGQFMEGRGKGLSLRFPRF
VRRREDKGVEEASTPEFLAGLFFKQERDSERISKAAVGGEKKTEGMEQDAEVDGQEFFKN
MRGEGAGSDVNL

NT seq 2559 nt +upstreamnt +downstreamnt
atggccagtccttccaaaaagaggaagaacttctccaacactcagccaaccagaacactt
caccacttcttcaacaaacaaacagctactaaaaaggaagctctagactcagttctgaca
ccagacccccaactaggcccagtggcacttacagatgagcaatacgcaaagaggctggcg
gaggaatggaagcaggaggataaagctatcagaaatgcgacaccgtcaacacacagggag
agtagtagggcaggagcgaagaggggtaggagcagctctccgagcacaaaatgcgcagcc
tcgagtccccacgcacacagcggagaagagggatggaaagacaatctagcggcggcaact
cttcgggcgtcacgagcagtcacccctgtccaaaaaccaaatacccccagaatcctgcaa
gaaccgaagagaatcgcggcatcggcagagggtgctctggagatagaaagagctatcgat
tcgatgccactcggtgaagacccacttaacccagaaatggccaggcgggaatgccactta
tgcgctccttactcacgcattcgtcctggtaaattcaacaaggtcaaggataaggataag
gataccctggtgaattttctaagaattttgatacggcttgatccagactctctacttccg
gccgtttggctaacgacaaacgatatcggtccttcgtatgagacgaatgagttcgggatt
gatgggtcgataatatcaaaagcgattatgaaggccagcgggataaccccggcaaccctt
aaaaagctaaataataaacatggtgatcctggggatgtcgcttttgaggcgaaggttaaa
cagaggaccttgatgatgaaaaagccaaccccactaactattgaaaatgtatacgcaaca
ctagttaagatctcccgagcatcggggaaaggctctcaagagatcaagcagcgccacata
gaacgcttacttgtcgacgccaaaggcgaggaaatccgatacctcactaggactctaata
cgccatctccgaatcggtgccgtaaagactacaatgctaatagcactctctcgtgccttt
tctttatctgctcctaagggggctaactggaatactccggaaattcctggcagcaaagag
ggaagacaagagttatttaccaaagcagaggaattccttaagcaatgccatgcccggagg
ccgaattacaatgacattgtaccaggtctactcagaggtgggatatcttccttggaggaa
aattgtggaacgagcattcacagccctctgaaaccaatgctgggtagcatcactcgagac
ctgggggaaatgctcttgaagttaaaaggttgtgaatttacttgcgagtataagtatgat
gggcaaagggctcagatacattgtgatgataatggaaaggtttccgtattcagtaggcac
ttggaattgatgacgggcaagtatccagatctagtgcagctagtgcccaatattcgtggc
gagggtgtagagtctttcatcatggagggagaggttgtagcaatggatactgagacaggg
ctcgtaaagaacttccaaacattagctggtagagaaagaaaaaatgtggatgtgggaaga
attagtgttgatgtctgtctatttgcgtttgatctcatgtatttgaacggtcaagaatta
ctctctcggccattccgcgaacgcagagaactcctgcagagcatacgtggataccatcca
ggactccttccattcatcgttagacctaaaatcttcacccctccagcttccgggccaccc
gaaggggcacaggaactagaatccaaacaaattcgctccagaaagggcaaagaagcagcc
cctgtcaagaggagctcccgagtaaaacctttattagcgacgtacgagccagacaaacgt
cttgagtcctggccaaaagtcaaaaaagactacactgctgcaaccgacaccctcgatcta
gttccgatagcggcctggtacggcaatggccgaaaagccgcctggtggtcgccgatcctc
ctcgcgctccacgacccagaaaccggttccttcgaagcggtctgcaaatgcatgtccggg
ttcacggacaagtattacattgaaatgaaagacacactcgcaccggacgggataaataca
tccatgactaagagagcatactatgaggtcgccgatagcttgacaccagcgatttggttt
gagcctagggaagtgtgggaagtggcatttgcagatatcacagttagcccgacgtatact
gccgcagggcaatttatggaagggcgggggaaggggctgagtctgaggttcccgagattt
gtgaggaggagggaggataagggggttgaggaagctagcacgccggagtttttggctggt
ttgttttttaagcaggaaagggacagtgagagaattagtaaggcggcagtaggtggagag
aagaaaactgaagggatggaacaggatgctgaggttgatggccaagagttcttcaaaaac
atgagaggtgaaggcgctgggagtgatgtcaacttgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   INRA-TML (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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