KEGG   Tuber melanosporum: GSTUM_00009642001Help
Entry
GSTUM_00009642001 CDS       T01282                                 

Definition
hypothetical protein
Orthology
K03144  
transcription initiation factor TFIIH subunit 4
Organism
tml  Tuber melanosporum
Pathway
Basal transcription factors
Nucleotide excision repair
Module
Holo-TFIIH complex
Brite
KEGG Orthology (KO) [BR:tml00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    GSTUM_00009642001
  Replication and repair
   03420 Nucleotide excision repair
    GSTUM_00009642001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     GSTUM_00009642001
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
INRA: 
UniProt: 
AA seq 460 aa AA seqDB search
MSGNIRGFGYLESLPPVTFRRLYQQPATALAIFRRMLPNLAKTIVTTLLYNETPVTLGDL
EALVRPESYREREDAFSKLRRLHIITENNLDVSLDPVFKKNFRLAGDHHSFGVPCNAEDK
KKITVQFLDDYATRQFEAILHYMVGTHNEVKPSKGVITLLTKGGLMERYGAGSSATITKN
GFSFLLQDGNPQIWALLIQYLEMSEELGMEQTDVLHFLLMLGSLELGQAYSVNTLTETQK
LMLADLRDYGIVYQRKSSSDRFYPTRLATTLTSESGGLRSASASMSSAMAKDAEEGKGFI
ILETNYRVYAYTDSPLQIAVLNLFVKLSTRYPNLVSGRISRRSIQEAIKMGITADQVIDY
LSAHAHPQMRKSLVTLPPTVVDQIRLWQIEGERMRTTTGFLFKDFHSTQEFEEVAKYAEE
LGVLKWKKPARRCMFVTRHEQIADWLKRRAQQQQPKKVAA
NT seq 1383 nt NT seq  +upstreamnt  +downstreamnt
atgtccggcaatattcgtggcttcgggtacttggagagtcttcctccggttaccttccgc
cgcctataccagcagcccgccaccgcactggccattttccggcgtatgctgcctaattta
gctaagacaattgtcacaactctactgtacaatgaaactcctgttaccctcggtgaccta
gaggctctggtccgtcctgagagctatcgagagcgggaagatgcttttagtaaattgcgc
agactgcatatcatcaccgagaataatttagacgtttctcttgaccccgtatttaaaaag
aattttcgactggcgggcgatcatcattcgttcggtgtaccttgtaacgcggaagacaaa
aagaagatcacagtccaatttctagatgactatgccactagacaattcgaggctatactg
cattatatggttgggacgcacaacgaggtcaagcctagcaagggcgtcatcactcttctc
accaagggtgggttgatggaacgctatggggcgggttcatcggccaccatcactaagaat
ggattcagctttctgctccaggatgggaatccacaaatttgggcactactgattcaatat
ctagagatgtctgaagagttgggaatggagcagacggatgttctacatttcctgctcatg
ttaggtagtctggagttgggacaagcatactctgttaataccttaacagagacacaaaag
cttatgttagctgacttgagagactacgggattgtttatcagagaaagtcatcttctgat
agattttatccgacaaggcttgctaccacccttacctcagaatcgggaggtcttcggtct
gcttctgctagcatgagttctgctatggcaaaagacgccgaagaggggaaggggtttatc
atcttggagacaaattatcgtgtctacgcatacacagactctccccttcaaattgctgtg
cttaacctcttcgtcaagctcagcactcgctatccaaaccttgttagcggccgtatatct
cgacgctcaatccaagaagccataaaaatgggtatcacagcggatcaagtgatagactac
ctaagcgcccacgctcatcctcaaatgcgaaaatcacttgtcactctcccaccaacagtc
gttgaccagatacgcctgtggcagattgaaggggaaagaatgaggactactacagggttc
ctatttaaagacttccattctacccaggagtttgaagaagtggctaaatacgcggaggaa
ttgggtgttcttaagtggaagaaacccgcgaggaggtgtatgtttgttacgaggcatgaa
cagattgctgattggctgaagagaagagcgcagcagcagcagccaaagaaggttgctgct
tga

DBGET integrated database retrieval system