KEGG   Tuber melanosporum: GSTUM_00009642001Help
Entry
GSTUM_00009642001 CDS       T01282                                 

Definition
hypothetical protein
Orthology
K03144  
transcription initiation factor TFIIH subunit 4
Organism
tml  Tuber melanosporum
Pathway
Basal transcription factors
Nucleotide excision repair
Module
Holo-TFIIH complex
Class
Genetic Information Processing; Transcription; Basal transcription factors [PATH:tml03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tml03420]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
INRA: 
UniProt: 
AA seq 460 aa AA seqDB search
MSGNIRGFGYLESLPPVTFRRLYQQPATALAIFRRMLPNLAKTIVTTLLYNETPVTLGDL
EALVRPESYREREDAFSKLRRLHIITENNLDVSLDPVFKKNFRLAGDHHSFGVPCNAEDK
KKITVQFLDDYATRQFEAILHYMVGTHNEVKPSKGVITLLTKGGLMERYGAGSSATITKN
GFSFLLQDGNPQIWALLIQYLEMSEELGMEQTDVLHFLLMLGSLELGQAYSVNTLTETQK
LMLADLRDYGIVYQRKSSSDRFYPTRLATTLTSESGGLRSASASMSSAMAKDAEEGKGFI
ILETNYRVYAYTDSPLQIAVLNLFVKLSTRYPNLVSGRISRRSIQEAIKMGITADQVIDY
LSAHAHPQMRKSLVTLPPTVVDQIRLWQIEGERMRTTTGFLFKDFHSTQEFEEVAKYAEE
LGVLKWKKPARRCMFVTRHEQIADWLKRRAQQQQPKKVAA
NT seq 1383 nt NT seq  +upstreamnt  +downstreamnt
atgtccggcaatattcgtggcttcgggtacttggagagtcttcctccggttaccttccgc
cgcctataccagcagcccgccaccgcactggccattttccggcgtatgctgcctaattta
gctaagacaattgtcacaactctactgtacaatgaaactcctgttaccctcggtgaccta
gaggctctggtccgtcctgagagctatcgagagcgggaagatgcttttagtaaattgcgc
agactgcatatcatcaccgagaataatttagacgtttctcttgaccccgtatttaaaaag
aattttcgactggcgggcgatcatcattcgttcggtgtaccttgtaacgcggaagacaaa
aagaagatcacagtccaatttctagatgactatgccactagacaattcgaggctatactg
cattatatggttgggacgcacaacgaggtcaagcctagcaagggcgtcatcactcttctc
accaagggtgggttgatggaacgctatggggcgggttcatcggccaccatcactaagaat
ggattcagctttctgctccaggatgggaatccacaaatttgggcactactgattcaatat
ctagagatgtctgaagagttgggaatggagcagacggatgttctacatttcctgctcatg
ttaggtagtctggagttgggacaagcatactctgttaataccttaacagagacacaaaag
cttatgttagctgacttgagagactacgggattgtttatcagagaaagtcatcttctgat
agattttatccgacaaggcttgctaccacccttacctcagaatcgggaggtcttcggtct
gcttctgctagcatgagttctgctatggcaaaagacgccgaagaggggaaggggtttatc
atcttggagacaaattatcgtgtctacgcatacacagactctccccttcaaattgctgtg
cttaacctcttcgtcaagctcagcactcgctatccaaaccttgttagcggccgtatatct
cgacgctcaatccaagaagccataaaaatgggtatcacagcggatcaagtgatagactac
ctaagcgcccacgctcatcctcaaatgcgaaaatcacttgtcactctcccaccaacagtc
gttgaccagatacgcctgtggcagattgaaggggaaagaatgaggactactacagggttc
ctatttaaagacttccattctacccaggagtttgaagaagtggctaaatacgcggaggaa
ttgggtgttcttaagtggaagaaacccgcgaggaggtgtatgtttgttacgaggcatgaa
cagattgctgattggctgaagagaagagcgcagcagcagcagccaaagaaggttgctgct
tga

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