KEGG T01282: GSTUM

Tuber melanosporum: GSTUM_00010383001

Entry

GSTUM_00010383001 CDS T01282

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

tml Tuber melanosporum

Pathway

tml03410	Base excision repair
tml03420	Nucleotide excision repair
tml03430	Mismatch repair
tml03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:tml03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tml03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:tml03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:tml03450]

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

NCBI-GeneID:

INRA:

UniProt:

AA seq 334 aa
MSEKLDGVRACWDGETFRSREGNPFYAPAWFTKRMPKDITLDGELFTTRGGFQDCVSIVR
TQNKPDAWKFSVTYQIFDIPSMGHKPFEERIAYLKDLFGRLRIRWVHVLEHTICKGRRHL
FDTLDKVTANKGEGLMLREPGSLYINNRSKTLMKVKRFFDADAIVRGHERGSGKNSNCTG
ALRVEMLDDNGEPTGKFFKIGTGLTDKQRQNPPKIGIIVIYRFQELSRDGNPRFPAHMVF
VMNKRATRLANAENAEESNRMSSKSVEADFRILLKWSKRCAPAELARFRQDERGANYHKG
VFLRIQRCYCGEERCGSTLINNDKLFSPLFIYCL

NT seq 1005 nt +upstreamnt +downstreamnt
atgtctgaaaagctggatggcgtgcgcgcgtgctgggatggagagactttccgcagcagg
gaggggaatccgttctatgcaccagcgtggtttacgaagaggatgccgaaagatataaca
ctcgacggcgaacttttcaccacccgcggcggcttccaggactgcgtttcaatcgtgcgc
acacagaataaacccgacgcttggaaattcagcgttacataccaaatcttcgacataccg
agtatggggcacaagccctttgaagaacgcatcgcatacctcaaagacctcttcgggaga
ctgcgcattcgctgggtgcacgttctcgagcatacaatatgcaaaggtcgaagacacctt
tttgatactttagacaaagtcacagccaacaaaggcgaagggctcatgctccgcgagccc
gggtcactatacatcaacaaccgttccaaaacgctcatgaaggtcaagcgtttctttgac
gccgacgctatcgtccgcggccacgagcgcggttccggcaagaactcgaattgcaccggc
gcactccgcgttgagatgctcgacgataacggcgagcccaccggtaagttctttaagatt
ggcaccgggctcacggataagcagcggcagaacccgccgaagattggcatcattgtgatc
tataggtttcaggagctatcacgagatgggaaccctaggtttccggcgcacatggtgttt
gtgatgaataagagagccacccgactcgcaaacgccgagaacgccgaggaatctaatcgc
atgtcgtctaagagtgtagaagcggatttccgcatattgcttaagtggtccaaacgttgc
gctccggcggaactagctcggtttaggcaggatgagcgtggggcaaattatcacaaaggt
gtatttttaagaattcagagatgttactgtggcgaggagcggtgtggctccacattgatt
aataatgacaaactcttctcccctctatttatctactgcttgtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   INRA-TML (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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