KEGG   Thermotoga maritima MSB8: Tmari_1770
Entry
Tmari_1770        CDS       T02663                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
tmm  Thermotoga maritima MSB8
Pathway
tmm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tmm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tmari_1770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmm03400]
    Tmari_1770
DNA repair and recombination proteins [BR:tmm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Tmari_1770
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Tmari_1770
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR UB2H AAA_30 DUF87 Kinesin AAA_22 AAA_25 SWI2_SNF2 Microtub_bd
Other DBs
NCBI-ProteinID: AGL50694
Position
complement(1736584..1738578)
AA seq 664 aa
MFKLVSEFEPTGDQPQAIEKLVEGLNRGMRFQTLLGVTGSGKTFTMANVIARVNRPALVI
SPNKTLAAQLYQEFKTFFPENRVEFFISYYDYYQPEAYIPTKDLYIEKNADINDVIVRMR
MSTLKSVRTRRDVVVVASVSCIYATGDPNDFDRMNINLAVGDRIDVLELAERLARIGYQR
TEDVSLSGCFRLKGDTVEIYPTYQDEGIRIEFFGDEVDSITLIDRFNRTTLEHLDKIIIY
PAVEFITTEEKLKRAVESIREELNERLSELKKQGKILEYERLKQRTLNDIELLETMGYCP
GIENYSRHFDGRKPGEPPYTLLDYFDKDFIVFIDESHITVPQLRAMYNGDRSRKKNLVEY
GFRLPSAYDNRPLTFEEFLKKTGQIIFVSATPGDFELSISEQVVEQIIRPTGLVDPEVEV
RPTAGQVDDLVNEIVKVKERGERALVTVLTKKTAELLSEHLTELGIRSLYLHSELDAIER
VEVLKKLRRGDVDVVVGVNLLREGLDLPEVSLVAIMDADVEGFLRSETTLIQIIGRTARN
VNGKVIMYADRITNAMKRAIEETNRRRRIQLEYNRKHGITPRSVIKPLEIEVFEQFMVKE
EPERYGDTVKNIFEMKKTLSPEEYMAVLEEEMYRAASELRYEDAAALRDELFRIREEIKK
KKGL
NT seq 1995 nt   +upstreamnt  +downstreamnt
gtgttcaagctggtgagtgaatttgagccaacgggtgaccagccacaggccatagaaaaa
cttgtagaaggtttgaacaggggaatgagatttcaaacgctcctcggtgttacggggagc
ggaaagactttcaccatggccaacgtgatagcgcgtgtgaacagacccgcccttgtgatc
tcaccgaacaagacgcttgccgcccagctttatcaggagttcaaaacgttcttcccggaa
aatcgagtggagttcttcataagttactacgattactatcaaccggaggcctatattcca
acgaaggatctttacatagagaagaacgctgacatcaacgatgtgatcgtgcgaatgaga
atgtccacgttgaaatctgtgagaactcgtcgcgatgtggtggtagttgcgagtgtttcg
tgtatttacgccacgggagacccgaacgatttcgataggatgaacataaatctcgctgtt
ggagatagaatagacgttctggaactcgcggaaagactggcaaggataggctatcagaga
acggaggatgtgtctctttctggatgtttcaggctgaagggagacacggtggagatctac
ccgacgtatcaggatgaagggatcaggatcgaattcttcggagacgaagtggactcgata
acgttgatagacagattcaatcgcaccacactggagcaccttgacaagatcatcatctat
cccgccgttgaatttatcacaacggaggagaaactcaaaagagccgtcgaatcaataagg
gaggagcttaacgaaagactctcagagctcaaaaaacagggaaagatcctcgagtacgaa
cgcttgaagcagagaactctgaacgacatagagctgctggagaccatgggatactgtcct
ggaatagagaactactccaggcacttcgatggaagaaagccgggagagcctccgtacact
cttctcgattatttcgataaagatttcatcgttttcatagacgagtcacacatcacggtt
cctcaactcagggccatgtacaacggagacagatccagaaagaaaaatctggtcgaatac
ggttttcgtctgccttccgcttacgacaacagaccgctgactttcgaagaatttttgaaa
aaaacaggccagatcatcttcgtttccgctacgccgggagacttcgaactctcgatctct
gaacaggtcgtcgagcagatcattagacccacaggactcgtggatccagaggtggaggta
cgtcccaccgcggggcaagtggatgatcttgtgaacgagatcgtgaaagtgaaagaaaga
ggggagagggccctcgttacggtgctcaccaaaaaaacggcagagcttttgagtgaacat
ctgacggaacttggaataagatcgctctatcttcactccgaactggacgccatagaaagg
gttgaggtcctgaagaaactgaggcgaggagacgtagacgtggtcgttggtgtgaacctt
ctgagggagggtctcgatcttcccgaggtgtcactggtagcgatcatggacgcggacgtg
gaaggcttcctgcgatctgaaacaacgctcatccagattatagggagaaccgcaaggaac
gtcaacgggaaggtcatcatgtacgccgacaggataacaaacgcgatgaagagagccatc
gaagaaacgaacagaagaaggagaattcagctcgagtacaatagaaaacacggtatcact
ccacgttccgtgataaagcctctggagatagaagtattcgaacagttcatggtgaaagaa
gagcctgagaggtacggagacactgtgaaaaacatctttgagatgaagaaaacgctctcc
ccagaggagtacatggccgttctcgaagaggaaatgtatcgggctgcaagtgagctcagg
tacgaagatgcagcggccttgagggatgagctgttcagaatcagggaagagataaaaaag
aaaaaggggctctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (21)   

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