KEGG   Phaeoacremonium minimum: UCRPA7_4173
Entry
UCRPA7_4173       CDS       T03102                                 
Name
(RefSeq) putative exosome complex exonuclease rrp4 protein
  KO
K03679  exosome complex component RRP4
Organism
tmn  Phaeoacremonium minimum
Pathway
tmn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tmn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UCRPA7_4173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmn03019]
    UCRPA7_4173
Messenger RNA biogenesis [BR:tmn03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     UCRPA7_4173
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     UCRPA7_4173
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1
Other DBs
NCBI-GeneID: 19324597
NCBI-ProteinID: XP_007914924
UniProt: R8BLZ1
Position
Unknown
AA seq 348 aa
MPITIITPKPVPRHFGRDAANSDSDSDSGGVDIEGDVAMRPAKRARRTGGDEIVTPGEII
TDDPQWMRGHGTYVNPGETSIISSVAGTVTRTNKLLSVRPLRARYTPEVGDLVVGRIVEV
QAKRWRVDVGSTQLASLPLSAINLPGGILRKRTETDELQIRTFFAEGDLLVAEVQQLFQD
GGAVLHTRSLKYGKLRNGLFAAVSGVGGGAGVVRSRRQVWTMDLATISGSGSKIDVILGV
NGYVWISKHVEAESPAVGGGVTSMEESVSVNVYSSQNDPIEVEVMREIARVRGVITALVE
NGLRVDEDMVMKGYREAVEMGRSSTEGEDDIYLGGEKGRQLAAALSGT
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgcctatcaccatcatcacaccaaagccagtgccacggcatttcggccgcgatgccgcc
aactcagactcggactcagactccggcggcgtcgacatagagggcgacgtcgccatgcgg
ccagccaaacgggccaggaggacaggcggcgatgagattgtcacacccggcgagatcatt
acggatgatccccagtggatgagaggacatggcacctacgtcaacccgggcgagacgtcc
atcatctcctcggtggcgggcacggtgacgcgcacaaacaagctgctgtcggtgcggccg
ctgcgggcgcgctacacgcccgaggtcggcgacctggtcgtgggccgcatcgtcgaggtg
caggcgaagcggtggcgcgtggacgtcggctcgacgcagctggcgtcgctgcccctgtcc
gccatcaacctgcccggcggcatcctgcgcaagcgcaccgagacggacgagctgcagatc
cgcaccttcttcgccgagggcgacctgctcgtcgccgaggtccagcagctcttccaggac
ggcggcgccgtgctgcacacgcgctccctcaagtacggcaagctgcgcaacggcctgttc
gccgccgtctcgggcgtcggcggcggcgcgggcgtcgtgcgcagcaggcgccaggtctgg
accatggacttggctacgattagcggcagcggtagcaagattgatgtcatcctcggcgtc
aacggctacgtctggatcagcaagcacgtcgaggccgagagcccggccgtcgggggcggc
gtgacgagcatggaggagagcgtgagcgtcaatgtctactcgagccagaacgaccctatc
gaggtggaggtcatgcgggagattgcgagggtcaggggtgtgatcaccgcgctggtggaa
aacggactacgcgtggacgaggatatggttatgaagggctatagggaggctgtggaaatg
ggccggagttctactgaaggcgaggatgacatctatctgggtggagagaaaggccgccag
ctagctgcggcattgtcaggtacctga

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