KEGG   Tistrella mobilis: TMO_0935
Entry
TMO_0935          CDS       T02128                                 
Symbol
rluD
Name
(GenBank) Pseudouridylate synthase, 23S RNA-specific
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
tmo  Tistrella mobilis
Brite
KEGG Orthology (KO) [BR:tmo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tmo03009]
    TMO_0935 (rluD)
Enzymes [BR:tmo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     TMO_0935 (rluD)
Ribosome biogenesis [BR:tmo03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    TMO_0935 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AFK52774
UniProt: I3TJ36
Position
complement(1030168..1031385)
AA seq 405 aa
MSGRDSRRPGDDDLPRETAVPAHSDPTEEPDLIEDPELIEDPGLIPDDDAGAEEDEPFAE
AEAGLDDDELSALEAAAVLGGTVDITLPTGFAEERADRLLANAAPSLSRGRVQALIRDGR
VTLDGATIADASRRVKPGQKLTVTVPVPEERRLEPEPMALDIVYEDEWLIVVDKPAGLVV
HPGAGNDRGTLVSGLLAHGDGRLSSIGAPTRPGVVHRIDKDTSGLIVFAKTDAAHLALAR
QFADHTIRRAYTAIVWGVPAVDPGRIEGNIGRHATDRQRMAVVTRGGKPAVTHYRIANMV
GVVEVSEKPLASVLDCRLETGRTHQIRVHLSHVGHPLVGDPVYGRSPARLQRMEDPRIKA
MCSFPRQALHARRLGFVHPVTGRRLKFESPLPQDMRELLASLEFF
NT seq 1218 nt   +upstreamnt  +downstreamnt
ttgagcggacgcgattcccgccggcccggcgacgacgacctgccccgcgagacggcggtg
ccggcccattccgatccgaccgaagagcctgacctcatcgaagacccggagctcatcgaa
gacccgggcctcatcccggacgacgacgccggggcggaggaggacgagccctttgcggag
gccgaggccggcctcgacgacgacgagctgtcggccctcgaagccgcggcggtgctgggc
ggcacggtcgacatcaccctgccgaccggtttcgcggaggaacgggcggatcggctgctg
gccaatgccgcgccctcgctatcgcgcgggcgggtccaggcgctgatccgcgacggccgg
gtcacgctcgacggcgcgacgatagccgacgcctcccggcgggtaaagcccggccagaag
ctgaccgtgaccgtgccggtgcccgaggaacgccgccttgagcccgagcccatggcgctc
gacatcgtttacgaggacgagtggctgatcgtggtcgacaaaccggccgggctggtggtg
catccgggcgccggcaacgaccgcggcaccctggtctcggggctgctggcccatggcgac
gggcggctgtcctcgatcggcgcccccacccgcccgggcgtggtgcaccggatcgacaag
gacaccagcggcctgatcgtgttcgcgaagaccgatgccgcccatctggccctggcccgg
cagttcgccgaccacaccatccgccgcgcctataccgccatcgtctggggcgtgccggcg
gtcgatcccggccggatcgagggcaatatcggccgccatgccaccgatcgccagcgcatg
gccgtggtcacccgcggcggcaagcctgcggtgacccattaccggatcgccaatatggtc
ggcgtggtggaggtatcggaaaagcctctggcctcggtgctggattgccggctggagacg
gggcggacccatcagatccgcgtccacctctctcatgtcggccacccgctggtgggcgac
ccggtctatggccgcagccccgcccggctgcagcggatggaagatccgcggatcaaggcc
atgtgcagcttcccgcggcaggccctgcatgcccgccggctgggcttcgtacacccggtc
accgggcggcgcctgaaattcgaaagccccctgccgcaggacatgcgggagctgctggct
agtttggaattcttctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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