KEGG   Tistrella mobilis: TMO_2686
Entry
TMO_2686          CDS       T02128                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
tmo  Tistrella mobilis
Pathway
tmo03030  DNA replication
tmo03430  Mismatch repair
tmo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tmo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TMO_2686 (dnaX)
   03430 Mismatch repair
    TMO_2686 (dnaX)
   03440 Homologous recombination
    TMO_2686 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmo03032]
    TMO_2686 (dnaX)
   03400 DNA repair and recombination proteins [BR:tmo03400]
    TMO_2686 (dnaX)
Enzymes [BR:tmo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TMO_2686 (dnaX)
DNA replication proteins [BR:tmo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TMO_2686 (dnaX)
DNA repair and recombination proteins [BR:tmo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TMO_2686 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_gamma3 DNA_pol3_delta2 DUF3646 AAA RuvB_N AAA_22 AAA_5 AAA_16 AAA_30 AAA_19 AAA_14 DUF815 AAA_assoc_2 AAA_18 AAA_2 nSTAND3 AAA_24 TsaE
Other DBs
NCBI-ProteinID: AFK54524
UniProt: I3TP36
Position
2970289..2972370
AA seq 693 aa
MTASDIAAEPAPTADAAGGATATGSAATGTPVEYRVLARKYRPRTFAELIGQDALVRTLT
NAIETGRLAHAFLLTGVRGVGKTSTARIIARALNCTGPDGSGGPTPAPCGVCENCRMIVE
DRHVDVLEMDAASRTGVNDIREIIEGVRYRPVGARFKIYIIDEVHMLSTSAFNALLKTLE
EPPAHVKFIFATTELRKVPVTVLSRCQRFDLKRVEPEVLSAHFSRIAGIEGAEIDDAAMA
LIARAADGSVRDGLSLLDQAIAHGAGRVTEHQVRDMLGLADRAIVVDLLDRTLSGDVAGA
LAIMDDQARAGADPAVIVEDMLALVHLMTRVKLAGAEGKGPVLTAAERDAAHRIAQRLGM
AHLGRAWQMLLKGLGEVRLAPVPQAAAEMVVIRLAHAADLPDPAELARMLKDAGTGGPAG
GGPGGPPPRPSPAAGASQAPTPAAPDRRPPEPPRAAPPPPRPAPPPRPVETPRPVEAAKP
APAPAARVPAPRPEPAAEPEQLLPDEIRTRLDRWREIIDLLRRHREIRIVPELRAAAHVA
EITVTAAERRLVLAFEPGTDGGLATKLQDLLSRIDDTPWQVLAAGALNDPALTAAARATP
TLVQYDEMRNRRMLALARRHPMVEAVFAAFPGATLEAVTPIFAAGAAADESGGQTEIERL
DAEMFDGVFDEEAYGAGDEDAAGADYDARFADF
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgaccgcatccgacatcgccgcagagccagccccgaccgcagatgcggccggcggcgcc
acggcgacgggatcggctgcaacggggacacccgtcgaataccgcgttctcgcccgcaaa
taccgcccccgcacctttgccgagctgatcggccaggatgccctggtccgcacgctgacc
aatgcgatcgagaccggccgcctggcccatgccttcctgttgaccggcgtgcgcggcgtg
ggcaagacctcgaccgcgcggatcatcgcccgggcgctgaactgcaccggccccgacggc
agcggcgggccgacgcccgcaccctgcggggtgtgcgagaactgccggatgatcgtcgaa
gaccgccatgtcgacgtgctggagatggacgcggccagccgcaccggcgtcaacgacatt
cgcgagatcatcgagggcgtgcgctaccgcccggtgggcgcgcggttcaagatctacatc
atcgacgaggtccacatgctctcgaccagcgcgttcaacgcgctgctcaagacgcttgag
gaaccgccggcgcatgtgaaattcatcttcgccaccactgaattgcgcaaggtgccggtg
acggtgctgtcgcgctgccagcgcttcgatctgaagcgggtcgagcccgaggtgctttcc
gcccatttctcccgcattgccgggatcgagggggcggagatcgacgacgcggccatggcg
ctgatcgcgcgggccgccgacggttcggtgcgtgacggcctctctctgctcgaccaggcc
atcgcccatggggcgggccgcgtcaccgaacatcaggtgcgcgacatgctgggcctggcc
gaccgggcgatcgtggtcgacctcttggaccggacattgtcgggcgatgtcgccggtgcg
ctcgcgatcatggacgatcaggcccgtgccggtgccgatccggcggtgatcgtggaagac
atgctggcgctggtgcatctgatgacccgcgtcaagctggccggcgccgagggcaagggc
ccggtgctgaccgccgccgagcgtgatgccgctcaccgcattgcccagcgtctgggcatg
gctcatctgggccgcgcctggcagatgctgctcaagggtctgggagaggtgcgcctcgcc
cccgtgccccaggctgcggccgagatggtggtgatccgtctggcccatgccgccgacctg
cccgacccggccgagcttgcccggatgctgaaggatgccgggacgggtggccccgcgggt
ggtggcccgggggggcccccgccccgccctagcccggccgccggggcgtctcaagcgccg
accccggcggcgccagaccggcgcccccccgaaccgccccgcgcggctcccccgccgcca
cgcccggctccgccgccccgtccggtggagacaccacgtccggtcgaggcagcgaaaccc
gcgccggctcctgcggccagggtgcccgcgcccaggcccgaaccggccgccgaacccgaa
cagctgctgcccgacgagatccgcacccggctcgatcgctggcgcgagatcatcgatctg
ctgcgccggcatcgcgagatccggatcgtgcccgagctgcgggccgccgcccatgtcgcc
gagatcaccgtcaccgcggccgagcgccggctggtgctggccttcgagccggggaccgat
ggcgggctcgccacgaaactgcaggatctgttgagtcggatcgacgataccccctggcag
gtgctggcggccggcgccctcaacgatccggcgctcaccgccgccgcgcgggcgacgccg
acgctggtgcagtacgacgagatgcgcaaccggcgcatgctggcgctggcccgccgccat
ccgatggtcgaggcggtgttcgcggccttccccggtgcgacgctcgaagccgtcaccccg
atcttcgccgccggcgccgccgccgacgagagcggcggtcagaccgagatcgaacgcctg
gatgccgagatgttcgacggcgtcttcgacgaagaggcctatggggccggcgacgaggat
gccgcgggggccgactacgacgcccggtttgccgatttctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (89)   

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