KEGG   Thermaerobacter marianensis: Tmar_0423Help
Entry
Tmar_0423         CDS       T01388                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tmr  Thermaerobacter marianensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:tmr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Tmar_0423
Enzymes [BR:tmr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Tmar_0423
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Tmar_0423
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
498106..499212
Genome map
AA seq 368 aa AA seqDB search
MPELPEVETVRRDLERHLEGAWIAGVRVLRPDVVVGATPPALERAIVGARFRRFARRGKY
LLLELEEPAAGAAGGTALAAGRGAAGAAVGGASEVNAGVPGTPEPAGRGQPAGPARPATP
RPPRCRWLVIHLRMTGRLTLARCGEPLLPHTHLILDVAGAAPWDQLRFSDPRRFGRVYLL
SKSPFSRRAVSGRARDTADRETELRHREDALPEGLRTLGPEPLSRRFTAAELARRLAGRR
APVKSLLLDQRAVAGVGNIYADEALFRARIHPARPAGELSPAEVARLVRALRRVLREAVA
AGGTTFSDYRDGLGREGRFARRLAAYGRQGEPCLRCGTPIATLRLGGRTAHFCPRCQPVR
TGGDHGQT
NT seq 1107 nt NT seq  +upstreamnt  +downstreamnt
gtgcctgagctgcccgaggtggagaccgtccgccgggacttggagcggcaccttgagggg
gcgtggatcgcgggcgtgcgggtgctgcgccccgatgtggtcgtgggcgcgacgccgccg
gcactggagcgggccatcgtgggggcccggttccgccgcttcgcccgccgcggcaagtac
ctgctcctcgagctggaggaaccggctgcgggcgccgccggcggcaccgccctggccgcc
gggcggggagctgccggagccgccgtggggggagcctccgaagtcaacgccggggttccg
gggacgccggagccggccggccgagggcagcctgccgggccggcccggcccgccacgcca
cggccgccccggtgccggtggctggtgatccacctgcgcatgacggggcggctgaccctg
gcgcgatgcggcgagcccctcctgccccatacccacctgatcctggatgtggcaggcgcg
gcgccgtgggaccagctgcggttctccgacccgcggcgctttggccgggtgtacctgttg
tcgaaaagccccttctcgcggcgagccgtctccgggagggcccgggacacggcggaccgg
gagacggagctccggcaccgggaggacgccttgcccgagggcttgcgcaccctggggccc
gagccgctgagccggcgcttcaccgcggcggagctggcccggcggctggcgggacgccgg
gcgcccgtcaagtccctgctgctggaccagcgggcggtggcgggcgtgggcaacatctac
gccgacgaggcgctgttccgcgcccgcatccatccggcccgcccggcgggggagctgtcg
cccgccgaggtggcccggctggtccgggccctccggcgggtcttgcgcgaagccgtggcc
gcaggcggcacgaccttctccgactaccgggacggcctcgggcgggaagggcggttcgcc
cgccggctggcggcctacggccgccagggggagccctgtctccgttgcggcacgcccatc
gccaccctgcgcctgggcggtcgcaccgcccacttctgcccgcggtgccagccggtgcgc
accggtggggaccacggccagacctga

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