KEGG   Tremella mesenterica: TREMEDRAFT_45797
Entry
TREMEDRAFT_45797  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K13026  ATP-dependent RNA helicase DHX57 [EC:5.6.2.6]
Organism
tms  Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:tms00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    TREMEDRAFT_45797
Enzymes [BR:tms01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     TREMEDRAFT_45797
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C DEAD HA2_C ResIII AAA_19 AAA_22 nSTAND3 RWD AAA_30 AAA_11 SRP54 ATPase ABC_tran ATPase_2 Med26_C
Other DBs
NCBI-GeneID: 18493795
NCBI-ProteinID: XP_007007735
JGI: Treme1_45797
UniProt: R7SBM2
Position
Unknown
AA seq 1283 aa
MRREFDFQRANRASSPETFTGSVVLRKKKSKNVYDLEEVRLTPHPPLQIGTAQEAKHYAA
TYALFRPPPLLIKHGSTTLIPSLRRKKSRLGKRNERRKKELRRMKKMLTQRMAQVAQGMM
QRFPTAVLEATRDISSNPSDLLSGSATPSLDLPNIESQLTTLGFRPAHITSALTALSAAN
ARLYSSSSSSTDPLVLSLSILSPLEAAIEWLLLHLPEDDLPPRYRTTSSAGDLVTGVSVG
GKEQLVKGWLIDKLTKGAGFPRKAVEEVIRNVEATSSALDILGRRLCGWDGDWAPEAYEP
WDGHETEGESRRSAREEEMLTLEAVLGERFTILSSTECTVDIEYERDNLTLHLLFDDASP
FPSPTHPTYPPAFYLSSDTVPSYMRLHLHSQLLRQFRDPERHDFTSVLEAGAGGAVLLMV
EHIETLLPDVLANPPDLGEVTRFLVPRLEEISPAIPKSDGPGRSKPEIRRHRHQATSADE
ASVQKRHQAMSQDPAYKKILDDRQKLPAWKERHNITSALDSNRVILVVGETGCGKTTQLP
QFILDHEISQNRGSKTNIIVTQPRRVAAMGVAQRVAYERLEDLDKATGTVGYAIRGERRA
SSDTRLLFCTTGVVLRRLGTDKDLGGVSHVIVDEAHERGVDTDLLICLLKEILERNKTLK
VVIMSATINERIFIDYFNGCPSLSIPGFTYPVKDHYLENVIPLLPNLQPTQQRFGSKQTE
EQKISIRADFEKLSLDPISQRTLEILSQSDRIDYNLISAVVTHIISISEEGAILIFLPGV
MEIRQCISNLSSASIGQVEILPLHANLTSTEQRRVFLSTGRKRKIVVSTNVAETSVTIPD
VVFVIDTGRVKETDYDVMTGMQKLEEGWTSRASGRQRRGRAGRTREGECFKLYTKRTEEK
KMMKFSKPEMLRVPLEMVLLQVKAMDENIDVEAFLLKAIDPPKLHAISTAWTTLIDLGIV
LSSSPSSPLTALGKHISSIPVDLRLAKMLVLAVIFKVLDPILTITALLSSKPLFISPLDN
RDTARTAREKFSTGRSDLLTDVKAYSAAMELSGMEQRKFCEENFISSSTVRDVRSLREDF
IGALQGIGFLGRKGEIEKFSQNGKLEGLVKGVVVGGLYPRIARINMPKATYERVQQGAVL
KDHEAKEVKLFDPSGRVFLHPSSILFTESGFKPGFIAYFSKAETSKVFLRDATEVPLYSL
LLFGGPLTINHFAGGVLIGKEGHIKLRAQPRVGALCSQLRRLLDAQLAETVESPDGVEGL
SSKDGEGVVNAMMALLTRDGLSQ
NT seq 3852 nt   +upstreamnt  +downstreamnt
atgaggagggaatttgactttcagagagccaacagagcgtcgtcacccgaaacattcacc
ggttcagtggttctacgtaaaaagaagagcaagaatgtgtatgatttggaagaagtacga
ttgactcctcatcctccattgcaaattgggacagcacaggaagctaagcattatgctgct
acttatgctttattcaggccgccgcccctgctcatcaagcatgggagtacgaccctgatc
ccttcgctgcgaagaaagaagtcgagactcggcaagcgaaacgaaaggagaaagaaagag
cttcggaggatgaaaaaaatgctcacccagcgcatggctcaggtagcacaggggatgatg
caacgatttcctactgctgtccttgaagcaactcgcgatatctcttccaatccatccgat
ctactttcaggatccgctaccccttccttggatttacctaatatcgagtctcagctcacc
acccttggttttcgtccagctcatatcacctcggctttgacagctttatccgctgccaac
gctcgactctactcttcatcttcgtcttccacggatcctctcgtattgtccctctctatt
ttgtcgccgcttgaggctgccatagagtggttgcttttgcatttaccagaggatgatctt
ccacctcggtatcgcactacatcttcggctggtgatcttgtcactggtgtttctgtagga
ggaaaggaacaattggtgaaaggttggttgatcgataaactcactaaaggagctggtttc
cccagaaaagcagtggaggaggtaattcggaatgtcgaagcgacctcaagtgccttggat
atactcggacgacgtctgtgtggctgggacggagactgggctccggaagcatacgaaccg
tgggatggtcatgagacagaaggagaatctcgaagatcagcgagagaggaagagatgtta
acgttggaggcggttttgggagagagattcaccattctctcatctacagaatgtacagtc
gacatcgagtacgaaagagataacctgactttacacttactgttcgacgatgcttctccg
tttccctctcccactcatccgacctacccaccggcattttatttgtcttcggacaccgtg
cccagctacatgcgacttcacctacattctcagctcctaagacaatttcgagatccggag
cgacatgacttcacttctgtgcttgaagctggggcgggtggagctgtgctgctcatggtg
gaacatatcgaaacgttgttaccggacgttctcgccaatccacctgacctgggtgaggta
acccgatttttggtcccacgtttggaagaaatctctccggcgatcccaaagtcggacgga
ccaggtcgatcgaagccagagatcaggagacatcgtcaccaagccacgtctgcggacgaa
gcttctgtgcagaaacgtcaccaagccatgtcacaggatcctgcatataagaaaatactg
gacgatcgccaaaagcttccggcttggaaggaacgacacaatatcacctcagctttggat
tccaatcgcgtaattttggtcgtgggtgaaactgggtgcggaaagaccactcaactacct
caatttatcctcgaccatgaaatctctcaaaataggggtagcaaaacgaacattatcgtc
actcaacctcgacgagtggcagctatgggtgtcgctcaacgagtcgcttatgaaagactt
gaagatctcgacaaagctaccggcactgtcggttacgctattcgaggagaaagacgtgct
tcttcagatacccgtctgttattctgtaccaccggagtggtcttacgtcgcttgggtacc
gacaaagatttgggtggtgtaagtcatgtgatcgtcgatgaagcgcacgaaagaggggta
gataccgatcttttgatctgtctgttgaaagaaatcttggaaaggaataaaactctcaaa
gttgttataatgtccgctacaattaacgagcgtattttcatcgattatttcaatggttgt
ccaagtttatccatacctggattcacctatcctgtgaaagatcactatctagaaaatgtc
attccccttttacctaatcttcaaccgactcaacaacgtttcggatctaaacaaacggaa
gaacagaagatatccattcgagctgatttcgaaaaactttcacttgatccgatttctcaa
cgtactcttgaaatcctttctcaatccgaccgaatagattataacctcatttctgccgtg
gtaacacatatcatatcaatttcggaagaaggtgcaatccttattttcttacctggtgtg
atggaaattcgacaatgtatttcaaacctttcttcagcttcaataggacaagtggaaata
ttacctttacatgctaatctaacttcaacagaacaacgtagagtatttttatcaacagga
agaaaaagaaaaatagtggttagtacgaatgtagcggaaacttctgtgactataccggat
gtggttttcgtgatagatactggaagagttaaggaaacggattatgacgttatgacgggg
atgcaaaaattagaagaaggttggactagtagagcttctggaagacaaagaaggggaaga
gctggaaggacaagagaaggtgaatgtttcaaattgtatactaaaagaacggaggaaaag
aaaatgatgaagttttcaaaaccggagatgttgagagttcctttggaaatggtcttatta
caggttaaagctatggatgagaatattgatgtggaggcttttttgttaaaagccattgac
ccacctaagctacacgcaatctcaacagcatggaccaccctgatcgatctcggaatcgtc
ctctcctcttctccctcttcccctctgacagcattaggtaaacacatatcctccattcct
gtagatcttcgtctagctaaaatgctggttttagccgttattttcaaagtcctcgatccc
attctcactatcacagctcttctatcttcaaaaccactcttcatttctcctcttgataat
cgtgataccgctcgaacagctcgtgaaaaattctccactggtcgttcggatttattaaca
gatgtcaaagcttattctgctgctatggaattgagtggtatggaacaaagaaagttttgc
gaagagaactttatctcttcttcgactgtgagggatgtgagaagtttgagagaagatttt
ataggggctttacaaggaatagggtttttaggaagaaaaggagagattgaaaagtttagt
cagaatgggaaattggagggtttagtaaaaggtgtagtggttggaggtttgtatcctcgt
atagctaggattaatatgcctaaagcgacttatgagagggtacaacaaggtgctgtgttg
aaagatcacgaagctaaagaagttaaactctttgatccatccggtcgtgtcttccttcat
ccttcttcgatattattcaccgaatcaggcttcaaaccaggtttcatagcgtatttttca
aaagctgaaacttcaaaggtttttctacgagatgctacagaagtccctctctattcactg
cttttatttgggggtccactcactatcaaccattttgcaggtggagtactcataggtaaa
gaaggtcatataaaacttcgagctcaacctagagtaggagctctttgttctcagttgaga
agattgttggatgctcaattggctgaaactgtcgaaagtcccgatggagtagaaggattg
agtagtaaagatggggaaggtgtggtgaatgctatgatggcacttttgacaagggatgga
ttatctcagtga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (44)   

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