KEGG   Tremella mesenterica: TREMEDRAFT_63337
Entry
TREMEDRAFT_63337  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
tms  Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:tms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tms04131]
    TREMEDRAFT_63337
   04121 Ubiquitin system [BR:tms04121]
    TREMEDRAFT_63337
Enzymes [BR:tms01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     TREMEDRAFT_63337
Membrane trafficking [BR:tms04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    TREMEDRAFT_63337
Ubiquitin system [BR:tms04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    TREMEDRAFT_63337
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-ANAPC11 zf-RING_16 Rad50_zn_hook zinc_ribbon_9 zf-C3HC4_3 Vps39_2 zf-RING-like DUF1451
Other DBs
NCBI-GeneID: 18496223
NCBI-ProteinID: XP_007005745
JGI: Treme1_63337
Position
Unknown
AA seq 424 aa
MSSRSGPAPFWICHECGAQMRPIMIDEIPHCASCHGEFVEVLDQEINPDPFHELPHPPTR
PSQLPPRIPTENRPPGSPPAEPSGILGSIFGLFQGNPENHVHPPALPSNPRTVGTGDTST
TNRGDGTRTWTFNIGGGRGSVTFGTIGGMGPGMGMGGGNVDDELGNIFPGFPRGLGGQNP
FPSIDTEIGPNTQQGPAMLRALMSALMDENMLPAHLQEPMFLGPQGMVNMGDYVATEQGF
HDVLEQLMQAAGPQGPLPATDAVIEGLPRYKLDEKALETSQFKDCPVCKDDFAVGDEVMR
IPCKHIFHPDCLQPWLKVNGSCPVCRFSLVPDEVNHPESSTAPNVTQQPQQNAGTAITNM
LNRLWGQSGTTSPTSPPTSGPSRQPDNLPNPSNPPNISNPPSQANPTPDPATSNSVVKLI
CSFR
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgtcgtctcgatcgggtcctgcgccattctggatatgtcatgagtgcggtgctcagatg
agacctatcatgattgacgagatcccacattgtgcatcatgtcatggggaattcgtagaa
gtgctggatcaggaaatcaatcctgatccattccatgaactccctcatcctcccactcgt
ccttcccaattacccccaaggatacctacagaaaatcgtcctccaggctctcccccagcc
gaaccatcaggtatcctcggatctatatttgggcttttccaaggtaatccggaaaaccac
gttcaccctcctgctctcccttcgaaccctcgtacagtgggaacaggagatacttcaaca
acgaacagaggtgatgggacacgtacttggactttcaacattggaggaggaagaggtagt
gtgacgttcggtacgataggtggaatggggccaggtatggggatgggtggtggtaatgtt
gatgatgaactcggcaacatattcccaggtttcccacgtggacttggaggacaaaacccg
tttcctagtattgatactgagataggtccgaatactcaacaaggtcccgcaatgttgaga
gcgttgatgtctgcattgatggatgaaaatatgttgcctgcgcatttacaagaacccatg
tttcttggacctcaagggatggtgaacatgggtgattatgtcgctaccgaacagggtttc
catgatgtgttggaacaactcatgcaagctgcaggtccacagggaccgttgccagctacg
gatgctgtgattgaaggtttgccgaggtacaaattagacgaaaaggctttggaaacaagt
cagtttaaggactgtcccgtttgcaaggatgattttgctgttggagatgaggtgatgcgg
ataccttgcaaacatatctttcatcctgactgtctacaaccctggctcaaagtcaatggc
tcatgtcccgtttgccgattctctctcgtaccggacgaagtaaatcatccagaaagctcc
accgctcccaatgtaacccaacaaccccagcaaaacgcaggaacagcaatcaccaacatg
ctcaatagattatggggtcaaagtggaactacgagtcctacttctccccctacttctggc
ccatcgcgacagccggacaatcttccaaacccgtcgaaccctcccaatatctccaatccc
cccagtcaggcaaatcccactcctgatccagcaacatccaactccgtcgtcaaactcatc
tgctccttccggtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (80)   

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