KEGG   Tremella mesenterica: TREMEDRAFT_66694
Entry
TREMEDRAFT_66694  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K14301  nuclear pore complex protein Nup107
Organism
tms  Tremella mesenterica
Pathway
tms03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    TREMEDRAFT_66694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tms03019]
    TREMEDRAFT_66694
   03036 Chromosome and associated proteins [BR:tms03036]
    TREMEDRAFT_66694
Messenger RNA biogenesis [BR:tms03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     TREMEDRAFT_66694
Chromosome and associated proteins [BR:tms03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    TREMEDRAFT_66694
SSDB
Motif
Pfam: Nup84_Nup100 TPR_19
Other DBs
NCBI-GeneID: 18497728
NCBI-ProteinID: XP_007001863
JGI: Treme1_66694
Position
Unknown
AA seq 783 aa
MSAPSSSYQTFASAFQSYQDHHSQAGPSSSHLDAPLQRHVILDEENGLVVQLMAAVEEQV
RSKSTAELYDAPSDDQLSVEEREALLLEHRTWQLLRTVYENRLNRDDPDFSPISAETLLQ
KCPYISPEELAQTVVEEDPELSLWAVLIEHLQTRPLLTEPPPLEARHGYLPSTIRRAQAS
KNALRGGHQTSLDPDFILRDPHGQGLAGEDQTYQTPLLATLWDLVRHGELDQAVKVCEQA
GEPWRGATLMGGRRWNMSGMSESNQPSLPAGNRTRALWKKSCRAIAKNPTLSAAERCLYA
ALISDLSTLIPACETWEDHLWAHVQHRIENRLEARCRDLGGFWEEEARLLGSDEEDSSQV
ARGGLDEVFASISSVQSESVAMAVNNPYYLAQKMIILDQTDQLLNRIADLIPQLAEGVSP
ELVGPYIRFFAHLVLLLRTLGQKVPDVAANIILEAYLQILERDGNSQLVAMYAACLREGS
GEESYARFLRSMDPNTTKEERMRALSRAKQHDLDVAIIARETVRMIIEEAFATIPPLTVE
LPDITSIVSGLSERDVYLIRSIEWLTMVPETFTDALVKSNDLARYFLALGQANAAQALLK
TLPSDLTDEQMSGADDDENYHQIEHEQFRQLFVVFACHELVGEVLSRAPKNTATKIEQHS
WRKSLGSAIDKVHGTTIDLLLSDWLKLPIERSSPRFKELSRIRQIFIPSLILQLHTLLYT
HRTLFPQMLQQALALSKIVADEENGIYEEFFSPGGERLVVYLDKIREAALAMLEIGKKPF
TEE
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgtctgcaccctcatcttcctatcagacattcgcctctgcttttcagtcgtatcaggat
catcactcccaggctggtccctccagctctcatctcgacgctcctcttcaacgtcatgtc
atattggatgaagagaatggcctggtggttcaattgatggctgcggtagaagaacaagtt
cggtccaagtctaccgccgagttatacgacgcgccgagtgatgatcaactctccgtggaa
gagagagaagctctgttactcgagcaccggacatggcagttacttcgtactgtctacgag
aatcggctgaaccgtgacgaccccgacttttcccccatatcagccgagacactgctccaa
aagtgcccgtacatctcccccgaagaattagcccagaccgtagtggaagaagacccagaa
ttgagcttatgggctgttttgatagaacatctacaaacacgtcctctcctcactgaacca
ccacctctggaagctcgccacggatatttaccatctaccatacgacgtgcccaagctagc
aagaacgctctgagaggaggacatcaaacctcgttggatcccgatttcatacttcgtgac
ccacatgggcaaggtctcgctggagaagatcaaacttaccaaacccccctgctcgcgact
ttgtgggacttggtgcggcatggtgagctcgatcaggctgtgaaggtctgcgagcaagcg
ggagagccttggcgaggtgcgaccttgatgggtggtaggcgatggaatatgagtggaatg
agtgagtcaaatcaaccctcacttccagctggcaaccgaacaagggcattgtggaagaaa
agttgtcgagctatcgccaaaaatcctactctatcggccgcggagagatgtctatacgcg
gcactcatctcagatttgtccacattaataccggcctgtgaaacttgggaagatcatcta
tgggcacatgttcaacatcggattgaaaaccgtctggaagctcgctgcagagatttggga
gggttttgggaagaagaggccagattattaggtagtgatgaggaggattcttctcaagta
gctagaggcgggttggatgaggtgttcgctagcatctcttctgtgcagtcagaaagtgtt
gctatggccgtaaacaatccttactacctcgctcagaagatgatcatacttgatcagact
gatcaacttctgaatcgcatagctgatttaatacctcaactggcagaaggtgtgtcgccg
gaattggtcggaccgtatattcgttttttcgcccatttggtcttacttcttcgtacgctc
ggacaaaaagtccccgatgtagcggcaaacatcattctggaagcgtatcttcagatacta
gaacgagatgggaactctcaattagttgccatgtacgccgcttgtcttcgggaaggtagt
ggagaagagagttatgctcgtttcctccgatccatggatccgaatacgaccaaagaagag
agaatgcgagctttgtctagagctaagcaacatgacttagatgttgcgatcatagcgagg
gagacggtgcgaatgataatcgaggaagctttcgcgactataccacctttgacggtggaa
ttaccggacatcacgtccatagttagtggattgagcgagagggatgtgtatttgatacga
agtatagagtggttgactatggtcccggagacgtttacggatgctttggtaaagtcaaat
gatttggcgaggtatttcttagcattgggacaggcgaacgctgctcaagctctgctaaag
accctcccttcagatctgacggacgagcagatgagtggtgccgacgacgatgaaaactac
catcagatcgagcatgaacaattcagacagttgtttgtggtatttgcatgtcatgagttg
gtcggtgaggttttgagtcgagcgccgaagaatacagcaaccaagattgaacaacatagc
tggcgtaaaagtctaggtagcgccatcgataaagttcacgggacgaccatagatttattg
ttgagtgattggttgaaacttccaatagaacgttcaagtccgagattcaaagaattatct
cgtattcgacaaatcttcatcccttcactcatcctacaacttcacactttactttacacc
catcgcaccctcttccctcagatgttacaacaagctttggcgttgagcaagatcgtggca
gatgaggagaatgggatatacgaagaattcttttctcccggaggagagagattggtcgtt
tatcttgataaaatcagagaagcagctttggcaatgttggaaattgggaagaaaccattt
acggaggaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system