KEGG   Tremella mesenterica: TREMEDRAFT_73618
Entry
TREMEDRAFT_73618  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K03361  F-box and WD-40 domain protein CDC4
Organism
tms  Tremella mesenterica
Pathway
tms04111  Cell cycle - yeast
tms04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    TREMEDRAFT_73618
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    TREMEDRAFT_73618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tms04121]
    TREMEDRAFT_73618
Ubiquitin system [BR:tms04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     TREMEDRAFT_73618
SSDB
Motif
Pfam: WD40 F-box-like NBCH_WD40 F-box ANAPC4_WD40
Other DBs
NCBI-GeneID: 18499010
NCBI-ProteinID: XP_007004328
JGI: Treme1_73618
Position
Unknown
AA seq 1008 aa
MSAQRESYDFPDTPTKGGGMAMPLNSGISTGSGMMWTPSGPVLQMENGIVETVVTHVSRT
TTTYAPIPLPHIPSPEKIGLPSRLDKEMYPLAEEPTPDDLRYFALNLGGKRVVLSEEGLP
PSSTHIGGGQGPGWVRAVGASTDQAERVNLTQALARAKGKERKRPHESRPGSRNSVTEIS
MSVPTPVTTETSSRQRHSPPRKKIRGLEDLSIPKNRDNALLSPLPSPDHETGPSASNHSP
SGMTPTIGTGLEMSALFSLPAVIAHFDSLPDKLQQHVLMHLFRRSRMPTIQRLSAFASVA
LKRDFITHLPHEVAVQILKKVDTRSLASAVRVSKSWQQMIDTERIVWRQRLIDDGLWYGL
GVEEEDEASVQRRYEALDYKIELSRNGKAGTPSEDEISLPINHQQPQRSVPLKHVYRRRY
TSHKNWLTARPEHSSFAGHGTNVVTCLQFDRDKIVSASDDHSINIYDTSTGQLRKRLDGH
EGGVWALEYKNDTLVSGSTDRTVRVWDLESLQESHVFHGHTSTVRCLQIVEPVFEPTSGE
YQPPYPMIVTGSRDSTLRVWKLPKKGEPSYVRPVSAENDTADPSSIPPEENPFHLHCLDG
HTSAVRALAAHGRICVSGSYDKDVRVWDIVKGTCIHVLKGHEQKVYSIVYDRHRNRCASG
SMDNTVKVWDVLTGECLHTLTGHTSLVGLLGASPNFLVSAAADASLRIWDANTHELKHVL
ASHGGAITCFQHDETKVVSGSDGTLKLWDIQSGHYVRDLVIGISSVWQVAFNGSLLVAAS
NRGGSTVFDVFDFGAPSDPSGVDDDSLDTLKRPPWERDNPREPHTYQGDDMEIDKEASKI
IPSSSQHLNPISTPHHLNSPFSNSNIITNEGNGNGHGQYPHSPSNMTQHPQPVFDHSSAT
EQSDDSRPRGKIIRSAVRRSARLGHGSTDWTMGFGGPIPGNLNFEPYMPGLPGSLPPLNN
AGPSNHAGPSNHAGPSNHASTSVAGGMEGRSSFAPIFDEEMGSGKEEE
NT seq 3027 nt   +upstreamnt  +downstreamnt
atgtccgcccaacgcgaatcatacgactttcccgacactcctaccaaaggcggtggaatg
gccatgccccttaactctggtatttccactggatcaggaatgatgtggactcctagtgga
ccggtgttacagatggaaaatggtattgtcgaaacagtagtcacccatgtcagtcgaacc
accaccacttatgctccaatacctctcccacatattccctctccagagaaaattggcctt
cctagtcgactcgacaaagaaatgtatcctctggctgaagaacccactccggacgatctg
agatatttcgctctcaatctcggtggcaaacgtgtcgtactttctgaagaaggccttcct
ccctcttccacccacataggaggtggtcaaggtccgggatgggtgagagctgtgggtgcc
tcgactgatcaagcggaacgtgtaaacctcactcaagctttagctcgtgcgaaagggaaa
gaacgtaaacgaccacacgaaagtcgacctggtagtcggaatagtgtcactgagatatcc
atgtccgttcctacacctgtcaccacagaaaccagttctcgtcaacgacacagtccccct
cgaaagaaaatccgaggattagaagatctttccattcctaaaaaccgagacaatgcttta
ttatccccacttccttctccagatcatgaaacaggtccatcagcttcgaatcacagtcct
agtggtatgactcccaccatcggaacaggtctagaaatgtcagctctgttttctctccct
gccgtcattgcgcatttcgattctcttcctgataaacttcaacaacacgttctcatgcat
cttttccgacgttctcgtatgcctaccattcaacgtctttcagcattcgcttccgtcgct
ctcaaaagagacttcataacacatttacctcatgaagtagccgtgcaaattctgaaaaaa
gtagacactcgttctctcgcttcagccgtcagagtcagtaaaagttggcaacaaatgatc
gacacagaacgtatagtttggcgtcaaagacttatagatgatggtctttggtatggtcta
ggagtggaagaagaagatgaagcttctgttcaacgtcgatatgaagcattagattataaa
atcgaattatcaagaaatggtaaagctggtactccaagtgaagatgaaatatctttaccg
ataaatcatcaacaacctcaacgttcagttcctttaaaacatgtttatagaagaagatat
acaagtcataaaaattggttgaccgcaagacctgaacatagttcttttgctggtcacggt
acgaacgttgtaacttgtttacaatttgatagagataaaattgtcagtgcttcagatgat
cattcgataaatatttatgatacttcaactggacaattaagaaaacgtttagatggacat
gaaggtggtgtttgggcattagaatataaaaatgatactttggtaagtggtagtacggat
agaacggtcagggtttgggatttagaatctttacaagagtctcatgtttttcatggtcat
acaagtacagtgagatgtttacaaatcgttgaacctgtttttgaacctacttctggagaa
tatcaaccaccttatcctatgatcgtcactggttcgagggattctactttgagagtttgg
aaattacctaaaaaaggtgaaccttcttatgttagaccggtatccgcagaaaacgatact
gccgatccaagttccataccacctgaagaaaacccttttcatcttcattgtctcgacgga
catacttctgccgttagagctttggctgctcatggtaggatctgcgtttcggggtcttat
gataaagatgtcagagtgtgggatatagtaaaagggacttgtatacatgttttgaaggga
catgaacagaaagtctactccatcgtctacgaccgtcaccgtaaccgatgtgcttcaggt
tccatggacaacaccgtcaaagtatgggatgtcctcaccggcgaatgtctccacactctc
accggtcacacttccttagtcggtcttttaggtgcttcacccaatttcctagtatcagca
gcagccgatgcttctctccgtatatgggatgccaacactcatgaactcaaacacgtcctc
gcttcccacggaggagccatcacttgttttcaacatgacgaaacgaaagtagtttccgga
tccgatggtaccctcaaattatgggacattcaatcaggtcattacgttcgtgatctagtc
attgggatttcatccgtttggcaagtagctttcaacggttctttattggttgcagcatcg
aacagaggtggatcgacagttttcgacgttttcgatttcggtgcaccttccgatccttca
ggtgttgatgatgattcattagatactttgaaaagaccaccttgggaaagagataaccca
agagaaccgcatacttatcaaggtgacgatatggaaattgataaagaagcctcaaagatt
attccttccagttctcaacatttgaacccaatttcgaccccacatcatttgaattcacct
ttttcaaattcgaatataatcacaaatgaaggaaatggaaatggacatggacaatatcct
cattcaccttccaacatgacacaacatcctcaacctgtatttgatcattcgagcgctacc
gaacaatcagatgattcaagaccaagaggtaaaatcatcagatcagccgttagaagaagt
gctaggttaggacatggaagtacagattggacaatgggattcggaggtcctatacctgga
aacttgaatttcgaaccttacatgcccggtttaccaggttcgttaccacctcttaataac
gctggaccatcgaatcatgctggaccatctaatcatgcgggaccttcgaaccatgctagt
acttcagttgctggtgggatggaaggaagatcaagtttcgcaccgattttcgatgaagaa
atggggtctgggaaagaggaggaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (61)   

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