KEGG   Trichechus manatus latirostris (Florida manatee): 101349512
Entry
101349512         CDS       T05135                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 8 isoform X1
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101349512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmu03019]
    101349512
Messenger RNA biogenesis [BR:tmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101349512
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     101349512
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 101349512
NCBI-ProteinID: XP_004371328
UniProt: A0A2Y9QKH2 A0A2Y9QLL5
Position
Unknown
AA seq 321 aa
MFFNPEQIKHCLACPLTESAERSFSGFFRMPAALVENSQVICEVWASNLEEEMRKIREIV
LSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPSG
INTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNV
KWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQE
VADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGLGTGVAQKQN
EDVDSAQEKMSILAIINNMQQ
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtttttcaatccagagcagatcaagcattgtctggcttgtcctctaacagagtcagcg
gaacgcagcttctcaggtttcttcaggatgcctgcagcacttgtggagaacagccaggtt
atctgtgaagtctgggccagcaatctagaagaagagatgaggaagatccgagaaatagtg
ctcagttacagttatattgccatggacacagaatttccaggtgttgtggtgcgaccaatt
ggtgaatttcgaagttccatagattaccaatatcaacttcttcggtgcaatgttgacctt
ttaaaaattatccagctgggtcttacatttacgaatgagaagggagaatatccttctgga
atcaatacttggcagttcaacttcaaattcaaccttacagaggacatgtactcccaggat
tccatagatctccttgctaactcaggactacagttccagaaacatgaagaggaagggatt
gacacattgcactttgcagagctgcttatgacatcgggggtggttctctgtgacaacgtc
aaatggctgtcatttcacagtggctatgactttggctacatggtaaagctgcttacagat
tctcgtttgccagaagaggaacatgaattctttcatattctgaaccttttcttcccatcc
atttatgatgtgaaatatctgatgaagagttgcaaaaatcttaagggaggtcttcaggaa
gttgctgatcagttggatttgcagaggattggaaggcaacaccaggcaggctcagactca
ctgctgacgggaatggccttcttcaggatgaaagagttattttttgaggacagtattgat
gatgccaagtactgtgggcggctctacggcctaggtacgggcgtggcccagaagcagaat
gaggatgtggactctgcccaggagaagatgagcatcctggccatcatcaacaatatgcag
cagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (15)   
   UniProt (2)   
   RefSeq(pep) (13)   
DNA sequence (13)   
   RefSeq(nuc) (13)   
Protein domain (1)   
   Pfam (1)   
All databases (42)   

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