KEGG   Trichechus manatus latirostris (Florida manatee): 101350593
Entry
101350593         CDS       T05135                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase SH3RF2
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tmu01009]
    101350593
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tmu04121]
    101350593
Enzymes [BR:tmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101350593
Protein phosphatases and associated proteins [BR:tmu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101350593
Ubiquitin system [BR:tmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101350593
SSDB
Motif
Pfam: SH3_2 SH3_9 SH3_1 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-RING_4 zf-RING_11 zf-C3HC4_4 zf-RING_10 zf-rbx1
Other DBs
NCBI-GeneID: 101350593
NCBI-ProteinID: XP_012413451
UniProt: A0A2Y9FZM7
Position
Unknown
AA seq 733 aa
MDDLTLLDLLECPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKARKEPRCPECRTLVFCNI
EALPANLLLVRLLDGVRAGQSTGRKGSFRRPRVLTSQDSRKSRNNPRGLQSSAFRLVPNT
RIHMDGVPRAKALCSYRGQNPGDLRFNKGDVILLRRQLDENWYQGEINGVSGVFPASSVE
VIKQLPQPPPLCRALYNFDLRDKDKSENQDCLTFLKDDIITVISRVDENWAEGKLGDKVG
IFPILFVEPNLTARHLLQMNKGRPLSHTKNLSLGSSSPRGKATDSPTLRRGPGSRRKGPG
QFSITTALNTLNRMVHSPSGRHMVEISPPVLISSSNPSVITQHMEKADVPPSSTGQVSTY
HPAPASPGHSTAIVSLPSSQQHLSANMFVALHSYSAHGPDELDLQKGEGIRVLGKYQDGW
LRGVSLVTGRVGVFPNNYVIPIFRRTSNFPESRSPGLYATWTLSTSSVSSQGSISEGDPQ
QSRPFKSVFVPTAIVNPVRSSTASLGTVAQGSLRKGRSSMRKNGSLQRPVQSGIPTLVVG
SLRRSPTMVVRPQQFQFYQPQGVPSSPSLVPVEMGPKPASTGEPALTCVSRGNDTRIHSA
DSSLIMEGKEIPIKSEPPLKPPASAPPSILVKPENSRNGTEKQVKTVRFQNYSPPPTKHY
TSHPTYGKPEQPATPKGSQPEAAPLGPEMTVLFAHRSGCHSGQQTDLRRKSTFGKAMIPV
PTASATQTVFPGK
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggatgatttgacgttacttgatcttctggagtgccccgtgtgttttgaaaagctcgac
gtcacagccaaagtcctcccctgccagcacaccttctgcaaaccatgtctacagaggatt
ttcaaggcccgcaaggagccgaggtgccccgaatgcagaaccctggtcttctgcaacatc
gaggccctgccggccaatctgctgctcgtgcgtcttctggatggtgtgcgcgctggacaa
agcaccgggaggaagggctccttccgcaggccccgtgtgctgacctcccaggacagccgg
aaaagcaggaacaaccctagaggtctgcagtccagcgctttccggctggtgcccaacacc
aggatccacatggatggggtacctcgagcaaaggccttgtgcagctaccgagggcagaat
cctggtgacctgaggtttaataagggagatgtcatcctcctccggagacagcttgatgag
aactggtaccagggagagatcaatggagtcagtggggtcttcccagcgagctctgtggaa
gtcatcaagcaactgccccagccacccccgctctgtcgtgccctctacaacttcgacctt
cgagacaaggacaagagtgagaaccaggattgtctgaccttcctgaaggatgatatcatc
actgtgatcagcagagtggatgagaactgggcagaaggcaagttaggagataaagtaggc
atcttccctatcttgtttgtggagccaaacctcaccgcaagacacctcctacagatgaac
aaaggccgtccgttatcccacacaaaaaacctgtctctggggtcctcatccccgagaggc
aaagcaaccgactcacccaccctccgtaggggccctgggtccaggaggaaggggcctggg
cagttctccatcacaacagccttgaacactctcaacaggatggtccattctccctcagga
cgccatatggtggagatcagccccccagtgcttatcagctccagcaacccctctgtgatc
actcagcacatggagaaagcagacgttcctcccagctccactgggcaggtcagcacttat
caccctgcacctgcctccccaggacattccacagccatcgtcagtctgcccagctctcag
caacacctctcagctaacatgtttgtagccctgcactcatactcagcccacgggcctgat
gagctggacctacagaagggagaaggcatcagggtccttgggaagtaccaggatggctgg
ctcagaggcgtctccttggtcactgggcgagtcggggtcttcccaaacaactatgtcatc
cccattttcagaaggacatctaattttccagagtcccggagccctggtctctatgccaca
tggacattatccacctcttctgtgtcctcccaaggcagcatttcagaaggtgatccccag
caaagccgtcccttcaaatccgtctttgtgcccacagccatagtcaaccccgtgaggagc
agcacagccagcctggggactgtagcacaggggtctcttcggaaagggcggagcagcatg
agaaagaatggatccctgcagagacctgttcagtcagggatccccacgcttgtggtgggc
tccctcagacgcagccctaccatggttgtgcggccgcagcagttccaattctaccagcca
cagggggtcccctcctcgccctccttggtgccagtggagatgggacccaagcctgcttcc
accggggagcctgccctcacgtgtgtcagcagaggcaacgacaccaggatccactctgcg
gacagttccctcatcatggaaggcaaggaaatccccatcaagagtgagcctccactaaaa
ccacctgcctctgccccaccatcgatcctggtgaaaccagaaaactccagaaatggcact
gaaaagcaagtcaaaaccgtgagatttcaaaattacagccctcctcctaccaaacattac
acctcccatcccacctatggaaagcctgaacagccagccacccctaaggggtcccagcct
gaagcagcccccttgggcccagagatgactgtcctattcgcccaccgaagtggatgccat
tccggacagcagacagacctccggagaaagtcaacttttggcaaggccatgatcccggtg
cccactgcctcagctacgcagacagtgtttcccggcaaatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (35)   

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