KEGG T03901: THMC

Thermotoga maritima Tma200: THMC_0854

Entry

THMC_0854         CDS       T03901

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

tmx Thermotoga maritima Tma200

Brite

KEGG Orthology (KO) [BR:tmx00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmx03032]
    THMC_0854 (gyrB)
   03400 DNA repair and recombination proteins [BR:tmx03400]
    THMC_0854 (gyrB)
Enzymes [BR:tmx01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     THMC_0854 (gyrB)
DNA replication proteins [BR:tmx03032]
Prokaryotic type
  DNA Topoisomerases
   THMC_0854 (gyrB)
DNA repair and recombination proteins [BR:tmx03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      THMC_0854 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 CofC

Other DBs

NCBI-ProteinID:

AKE26748

Position

857673..859583

AA seq 636 aa
MEKYSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVT
LHEDGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKISGGLHGVGVSV
VNALSEWLEVRVHRDGKIYRQRYERGKPVTPVEVIGETDKHGTIVRFKPDPLIFSETEFD
PDILEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIK
RTEKVKTKNGEDEVIVEIAFQYTDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEY
GKKHNFLKKDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREEL
KKIFDANPELVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTHREK
TELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTG
IGDDFDESKLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIK
AGREEFYVYSDQELAEYKEKLQGKRIEIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIE
DAEEADRLFEILMGNDPSSRREFIERHALKVKELDI

NT seq 1911 nt +upstreamnt +downstreamnt
atggaaaagtactccgctgaaagtataaaggttttaaaaggactggaacctgtccgaatg
cgacccggaatgtacataggatccacgggcaaacgtggattgcatcacctcgtgtacgaa
gtggttgacaacagtgttgatgaggcactcgctggatactgcgactggatacgtgtgact
ctccatgaagatggaagtgtggaagtcgaggacaacggaaggggaatccccgttgacata
catccagaagagggaagaagcgctctggaagtggttttcacagttcttcatgcgggcgga
aaattctccaaggattcctacaagataagcggtggcctgcacggtgttggtgtatcggtg
gtgaacgctctttcggagtggctggaagtgcgggtacatcgtgacgggaagatctacaga
caaagatacgaaaggggtaaaccggtcacacctgtggaagtgataggagaaaccgataag
cacggcacgatcgttcgattcaaacccgatcctctcatattttcggagacagagttcgat
cccgacatactcgaacacagattgagagagatagctttcctagtaccaggactcaaaata
gaattcgaagacagaataaacggagagaagaaaaccttcaaattcgacggaggcatagtg
gagtatgtgaagtatttgaaccgtgggaaaaaagctctacacgatgtgatacacataaag
agaacggaaaaagtgaaaacaaaaaatggtgaagacgaagtgatagtggagatcgccttt
caatacactgattcgtattctgaagatatcgtgtcttttgcaaacaccataaaaactgtc
gatggtggaactcatgttacagcctttaagagcaccctcacaagactcatgaacgagtat
gggaaaaaacataattttctcaagaaagacgattccttccagggtgaggatgttagagaa
ggcctcacggcggttatcagtgtttacgtgaagaaccccgaattcgaagggcaaacaaag
tcaaaactcggcaacgaagaagtcaaggaagcggtaaccaaggctatgagagaagagctg
aaaaaaatattcgacgcgaatcccgagctcgtgaaaacaattctttcaaagatcatgagc
accaaacaggcaagagaagcggcaaagagagctcgagaaatggtgagaaggaaaaacgtt
cttcaaaacacaacacttcccggaaaactggcagactgtagttccacacatagagagaaa
acggagcttttcatcgtggaaggtgactctgccgggggatcggcaaaacaggccagagac
agagaatttcaggctgttcttcccataagaggaaagattttgaacgtggaaaaatcatct
ctcgatagattactgaaaaacgagcagatcagtgacataattgttgcagtgggaacgggc
ataggagatgatttcgacgaaagcaagctcagatacggtaggattatcatcatgaccgac
gccgatatagacggtgcacacataagaactctccttctgacactcttctatagatacatg
agacccctcatcgaacagggcagggtatacatagcactcccacctctctacaggatcaaa
gctggaagagaagagttctacgtttacagtgaccaggagctggcggaatacaaagagaaa
ctccagggaaaaaggatcgaaattcaacggtacaaaggacttggcgagatgaatcctgag
cagctctgggaaacaacgatgaatccagaaacgagaaaaatcataagggtaactatagaa
gatgccgaagaagcggatagactctttgaaattctcatgggtaacgatccatccagtaga
agggagttcatagaaaggcacgctctgaaagtgaaagaactggatatctag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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