KEGG T00682: Tneu

Thermoproteus neutrophilus: Tneu_0068

Entry

Tneu_0068 CDS T00682

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

tne Thermoproteus neutrophilus

Pathway

tne03030	DNA replication
tne03410	Base excision repair
tne03420	Nucleotide excision repair
tne03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:tne03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:tne03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tne03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:tne03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2 Bac_luciferase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

63169..64923

AA seq 584 aa
MQFGELVKTLAAVESTTQRTTMVKLLTSLLKRARPDEVDKIVYFVLGDLKPPWEGVELGV
AEKLCLRAVSKAAGTPLSELEAVYKRTGDVGEAARRALSAAKRPGLLAFGQQKPLEVSEV
YDTLLKVAKAAGEGAQDMKISLLASLFARATPEEAKYIARFVVGKLRLGVADMTLLEALS
EAFGVGKEALERAYHVWPDMGKLARHVAEGRPLEEVKITPGVPVLPMLAQRLSSASEILA
KLGGAAVCEYKYDGERAQIHISGGSVKIFSRRLEDITHAYPDVVKAVKESVAAGEAILEG
EIVAVDPDTGDMLPFQELMHRKRKHEVAAAVESYPAVLNLFDVLYLDGEDLTGEPLIYRR
LRLSEVVHETEKVSIARWRLFDDPGEVDVFFHEAVSLGMEGLVCKSPTSIYEMGARGWNW
IKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLAAYDPQTDMFYTVCKVGSGFTD
ADLKKMYEVLQPYKIPHRHPRVVSKMTPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVRP
GVGLAIRFPRFTGRYRTDKSPEQATTPAEMVELYKRQKKVAQPE

NT seq 1755 nt +upstreamnt +downstreamnt
gtgcagtttggggagctggtgaaaaccctcgccgctgtggagtccaccacccagaggacc
accatggttaagctcctcacctccctcctcaagagggcgaggccggacgaggtggacaag
atagtctacttcgtgctgggggatctcaagcccccgtgggagggggtggagctgggcgtg
gctgagaagctctgtctcagggctgtttctaaggcggcgggtacgccgctgtctgagctg
gaggcagtctacaagcggactggggacgtgggcgaggcggccaggagagccctctccgcg
gctaagaggccgggtctcctggcgtttggccagcagaagcctctggaggtgtcggaggtg
tacgacaccctcctaaaggtggcgaaggcggcgggggagggggcgcaggacatgaagata
tcgcttctggcctccctcttcgccagagctacccccgaggaggctaagtacatcgccagg
tttgtggtggggaagctcaggctcggcgtcgccgatatgacgttgctggaggcgctctct
gaggccttcggcgtggggaaggaggccctcgagagggcgtaccacgtgtggccagatatg
ggcaagctggcgcgccacgtggccgagggccggcccctcgaggaggtcaagatcacgccg
ggggtccccgtactccccatgcttgcgcagaggctctccagcgcttccgagatcttggcg
aagctcggcggcgcggctgtctgcgaatataaatacgacggcgagagggcgcagattcac
atcagcggcggctcggtcaagatcttcagcaggaggctggaggacatcacccacgcctat
ccagacgtggtcaaggccgtgaaggagtccgtggcggcgggggaggccatactggagggg
gagatagtggcggtcgacccagatacgggggatatgttgccgtttcaggagctgatgcat
aggaagaggaagcacgaggtggcggcggctgtggagagctacccagcggttttaaacctc
ttcgacgtcctctacctagacggcgaggatctcacgggggagcccctcatctacagaagg
ctgaggctgtcggaggttgtgcatgagacggagaaggtctcgatagccaggtggaggctt
ttcgacgaccccggcgaggtagacgtcttcttccacgaggcggtctccctagggatggag
ggcttggtctgtaaatcccccacgtctatatacgagatgggggcccgggggtggaactgg
attaagtacaagagggactacaaaagcgagatgattgacaccgtggatctggtggtggta
ggcgccttctacggcagaggcaaacgggcggggctctacggcgccttcctcctagccgcc
tacgacccccagacggacatgttctacacagtgtgtaaggtggggagcggcttcaccgac
gcggacctcaagaagatgtatgaagtgctgcagccgtacaagatcccgcatagacacccg
cgggtggtctcgaagatgacccccgacgtctggttcaccccccaggtggtgatcgaggtg
atcggggcggagatcaccctctcgccgcttcacacctgttgcctcggcgccgtgaggccg
ggggtgggcctcgccattaggttccccaggttcaccggccggtacagaaccgacaaatcg
ccggagcaggccaccacgccggcagagatggtggagctctacaagaggcagaagaaggtg
gctcagcccgagtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-TNE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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